RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 PRAC1Q96KF2 57 aa5.71□□□□□ -1.5
TMEM53-204ENST00000372243 SPRR2EP22531 72 aa5.7□□□□□ -1.5
TMEM53-204ENST00000372243 SPRR2BP35325 72 aa5.7□□□□□ -1.5
TMEM53-204ENST00000372243 SPRR2AP35326 72 aa5.7□□□□□ -1.5
TMEM53-204ENST00000372243 KRTAP19-3Q7Z4W3 81 aa5.67□□□□□ -1.5
TMEM53-204ENST00000372243 MT1LQ93083 61 aa5.66□□□□□ -1.5
TMEM53-204ENST00000372243 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
TMEM53-204ENST00000372243 MT1GP13640 62 aa5.62□□□□□ -1.51
TMEM53-204ENST00000372243 LCE5AQ5TCM9 118 aa5.62□□□□□ -1.51
TMEM53-204ENST00000372243 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.52
TMEM53-204ENST00000372243 SPRR2DP22532 72 aa5.5□□□□□ -1.53
TMEM53-204ENST00000372243 MT1MQ8N339 61 aa5.5□□□□□ -1.53
TMEM53-204ENST00000372243 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
TMEM53-204ENST00000372243 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
TMEM53-204ENST00000372243 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
TMEM53-204ENST00000372243 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
TMEM53-204ENST00000372243 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
TMEM53-204ENST00000372243 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
TMEM53-204ENST00000372243 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
TMEM53-204ENST00000372243 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
TMEM53-204ENST00000372243 KRTAP2-2Q9BYT5 123 aa5.21□□□□□ -1.58
TMEM53-204ENST00000372243 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
TMEM53-204ENST00000372243 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
TMEM53-204ENST00000372243 H3BS24 57 aa5.1□□□□□ -1.59
TMEM53-204ENST00000372243 KRTAP9-6A8MVA2 160 aa5.08□□□□□ -1.6
TMEM53-204ENST00000372243 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
TMEM53-204ENST00000372243 A0A0A0MQY5 61 aa5.04□□□□□ -1.6
TMEM53-204ENST00000372243 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
TMEM53-204ENST00000372243 KRTAP5-4Q6L8H1 288 aa4.95□□□□□ -1.62
TMEM53-204ENST00000372243 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
TMEM53-204ENST00000372243 MT1AP04731 61 aa4.83□□□□□ -1.64
TMEM53-204ENST00000372243 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
TMEM53-204ENST00000372243 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
TMEM53-204ENST00000372243 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
TMEM53-204ENST00000372243 MT4P47944 62 aa4.75□□□□□ -1.65
TMEM53-204ENST00000372243 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
TMEM53-204ENST00000372243 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
TMEM53-204ENST00000372243 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
TMEM53-204ENST00000372243 KRTAP4-6Q9BYQ5 205 aa4.7□□□□□ -1.66
TMEM53-204ENST00000372243 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
TMEM53-204ENST00000372243 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
TMEM53-204ENST00000372243 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
TMEM53-204ENST00000372243 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
TMEM53-204ENST00000372243 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
TMEM53-204ENST00000372243 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
TMEM53-204ENST00000372243 KRTAP5-2Q701N4 177 aa4.43□□□□□ -1.7
TMEM53-204ENST00000372243 MT3P25713 68 aa4.4□□□□□ -1.7
TMEM53-204ENST00000372243 AHNAK2Q8IVF2 5795 aa4.28□□□□□ -1.72
TMEM53-204ENST00000372243 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
TMEM53-204ENST00000372243 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
TMEM53-204ENST00000372243 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
TMEM53-204ENST00000372243 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
TMEM53-204ENST00000372243 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
TMEM53-204ENST00000372243 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
TMEM53-204ENST00000372243 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
TMEM53-204ENST00000372243 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.78
TMEM53-204ENST00000372243 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
TMEM53-204ENST00000372243 INE1O15225 51 aa3.87□□□□□ -1.79
TMEM53-204ENST00000372243 KRTAP5-1Q6L8H4 278 aa3.87□□□□□ -1.79
TMEM53-204ENST00000372243 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
TMEM53-204ENST00000372243 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
TMEM53-204ENST00000372243 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
TMEM53-204ENST00000372243 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
TMEM53-204ENST00000372243 KRTAP9-9Q9BYP9 154 aa3.62□□□□□ -1.83
TMEM53-204ENST00000372243 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
TMEM53-204ENST00000372243 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
TMEM53-204ENST00000372243 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
TMEM53-204ENST00000372243 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
TMEM53-204ENST00000372243 PRM1P04553 51 aa3.21□□□□□ -1.9
TMEM53-204ENST00000372243 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
TMEM53-204ENST00000372243 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
TMEM53-204ENST00000372243 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
TMEM53-204ENST00000372243 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
TMEM53-204ENST00000372243 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
TMEM53-204ENST00000372243 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
TMEM53-204ENST00000372243 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
TMEM53-204ENST00000372243 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 135.5 ms