RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 SPRR2AP35326 72 aa6.1□□□□□ -1.43
TMEM53-203ENST00000372242 KRTAP19-5Q3LI72 72 aa6.07□□□□□ -1.44
TMEM53-203ENST00000372242 LCE1AQ5T7P2 110 aa6.07□□□□□ -1.44
TMEM53-203ENST00000372242 NEBP20929 6669 aa6.06□□□□□ -1.44
TMEM53-203ENST00000372242 PP632Q6XCG6 107 aa6.05□□□□□ -1.44
TMEM53-203ENST00000372242 MT1EP04732 61 aa6.02□□□□□ -1.45
TMEM53-203ENST00000372242 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
TMEM53-203ENST00000372242 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
TMEM53-203ENST00000372242 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
TMEM53-203ENST00000372242 SPRR2DP22532 72 aa5.88□□□□□ -1.47
TMEM53-203ENST00000372242 LCE5AQ5TCM9 118 aa5.85□□□□□ -1.47
TMEM53-203ENST00000372242 MT1LQ93083 61 aa5.83□□□□□ -1.48
TMEM53-203ENST00000372242 LUZP6Q538Z0 58 aa5.83□□□□□ -1.48
TMEM53-203ENST00000372242 KRTAP20-1Q3LI63 56 aa5.81□□□□□ -1.48
TMEM53-203ENST00000372242 MT1GP13640 62 aa5.78□□□□□ -1.48
TMEM53-203ENST00000372242 KRTAP2-3P0C7H8 128 aa5.76□□□□□ -1.49
TMEM53-203ENST00000372242 KRTAP2-4Q9BYR9 128 aa5.76□□□□□ -1.49
TMEM53-203ENST00000372242 MT1MQ8N339 61 aa5.71□□□□□ -1.5
TMEM53-203ENST00000372242 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
TMEM53-203ENST00000372242 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
TMEM53-203ENST00000372242 DSTQ03001 7570 aaKnown RBP5.64□□□□□ -1.51
TMEM53-203ENST00000372242 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
TMEM53-203ENST00000372242 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
TMEM53-203ENST00000372242 KRTAP2-2Q9BYT5 123 aa5.6□□□□□ -1.51
TMEM53-203ENST00000372242 KRTAP2-1Q9BYU5 128 aa5.6□□□□□ -1.51
TMEM53-203ENST00000372242 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
TMEM53-203ENST00000372242 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
TMEM53-203ENST00000372242 LOC100996750A0A140TA64 210 aa5.3□□□□□ -1.56
TMEM53-203ENST00000372242 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
TMEM53-203ENST00000372242 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
TMEM53-203ENST00000372242 KRTAP5-5Q701N2 237 aaPredicted RBP5.19□□□□□ -1.58
TMEM53-203ENST00000372242 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
TMEM53-203ENST00000372242 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
TMEM53-203ENST00000372242 INE1O15225 51 aa5.18□□□□□ -1.58
TMEM53-203ENST00000372242 MT4P47944 62 aa5.14□□□□□ -1.59
TMEM53-203ENST00000372242 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
TMEM53-203ENST00000372242 KRTAP4-6Q9BYQ5 205 aa5.04□□□□□ -1.6
TMEM53-203ENST00000372242 HMCN1Q96RW7 5635 aa4.99□□□□□ -1.61
TMEM53-203ENST00000372242 MT1AP04731 61 aa4.95□□□□□ -1.62
TMEM53-203ENST00000372242 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
TMEM53-203ENST00000372242 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
TMEM53-203ENST00000372242 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.63
TMEM53-203ENST00000372242 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
TMEM53-203ENST00000372242 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
TMEM53-203ENST00000372242 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
TMEM53-203ENST00000372242 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
TMEM53-203ENST00000372242 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
TMEM53-203ENST00000372242 AHNAK2Q8IVF2 5795 aa4.61□□□□□ -1.67
TMEM53-203ENST00000372242 GPR98Q8WXG9 6306 aa4.57□□□□□ -1.68
TMEM53-203ENST00000372242 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
TMEM53-203ENST00000372242 MT3P25713 68 aa4.51□□□□□ -1.69
TMEM53-203ENST00000372242 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
TMEM53-203ENST00000372242 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
TMEM53-203ENST00000372242 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
TMEM53-203ENST00000372242 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
TMEM53-203ENST00000372242 KRTAP5-1Q6L8H4 278 aa4.08□□□□□ -1.76
TMEM53-203ENST00000372242 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
TMEM53-203ENST00000372242 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
TMEM53-203ENST00000372242 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
TMEM53-203ENST00000372242 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
TMEM53-203ENST00000372242 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
TMEM53-203ENST00000372242 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
TMEM53-203ENST00000372242 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
TMEM53-203ENST00000372242 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
TMEM53-203ENST00000372242 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
TMEM53-203ENST00000372242 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
TMEM53-203ENST00000372242 PRM1P04553 51 aa3.6□□□□□ -1.83
TMEM53-203ENST00000372242 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
TMEM53-203ENST00000372242 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
TMEM53-203ENST00000372242 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
TMEM53-203ENST00000372242 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
TMEM53-203ENST00000372242 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
TMEM53-203ENST00000372242 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
TMEM53-203ENST00000372242 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
TMEM53-203ENST00000372242 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
TMEM53-203ENST00000372242 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
TMEM53-203ENST00000372242 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 140.6 ms