RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 KRTAP19-4Q3LI73 84 aa8.14□□□□□ -1.11
LHX3-201ENST00000371746 CRCT1Q9UGL9 99 aa8.12□□□□□ -1.11
LHX3-201ENST00000371746 SPRR2FQ96RM1 72 aa8.08□□□□□ -1.12
LHX3-201ENST00000371746 SYNE2Q8WXH0 6885 aaKnown RBP8.06□□□□□ -1.12
LHX3-201ENST00000371746 KRTAP19-3Q7Z4W3 81 aa8.05□□□□□ -1.12
LHX3-201ENST00000371746 KRTAP4-3Q9BYR4 195 aa8□□□□□ -1.13
LHX3-201ENST00000371746 MT1GP13640 62 aa7.96□□□□□ -1.14
LHX3-201ENST00000371746 MT1MQ8N339 61 aa7.96□□□□□ -1.14
LHX3-201ENST00000371746 INE1O15225 51 aa7.86□□□□□ -1.15
LHX3-201ENST00000371746 LCE5AQ5TCM9 118 aa7.86□□□□□ -1.15
LHX3-201ENST00000371746 DSTQ03001 7570 aaKnown RBP7.82□□□□□ -1.16
LHX3-201ENST00000371746 MDN1Q9NU22 5596 aa7.81□□□□□ -1.16
LHX3-201ENST00000371746 LOC100996750A0A140TA64 210 aa7.81□□□□□ -1.16
LHX3-201ENST00000371746 KRTAP5-9P26371 169 aa7.73□□□□□ -1.17
LHX3-201ENST00000371746 LCE1AQ5T7P2 110 aa7.63□□□□□ -1.19
LHX3-201ENST00000371746 KRTAP2-3P0C7H8 128 aa7.61□□□□□ -1.19
LHX3-201ENST00000371746 KRTAP2-4Q9BYR9 128 aa7.61□□□□□ -1.19
LHX3-201ENST00000371746 KRTAP2-1Q9BYU5 128 aa7.61□□□□□ -1.19
LHX3-201ENST00000371746 SPRR2EP22531 72 aa7.52□□□□□ -1.21
LHX3-201ENST00000371746 SPRR2BP35325 72 aa7.52□□□□□ -1.21
LHX3-201ENST00000371746 SPRR2AP35326 72 aa7.52□□□□□ -1.21
LHX3-201ENST00000371746 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.5□□□□□ -1.21
LHX3-201ENST00000371746 KRTAP9-6A0A140TA67 174 aa7.49□□□□□ -1.21
LHX3-201ENST00000371746 KRTAP6-3Q3LI67 103 aa7.37□□□□□ -1.23
LHX3-201ENST00000371746 SPRR2DP22532 72 aa7.21□□□□□ -1.25
LHX3-201ENST00000371746 KRTAP6-1Q3LI64 71 aa7.11□□□□□ -1.27
LHX3-201ENST00000371746 KRTAP5-5Q701N2 237 aaPredicted RBP7.11□□□□□ -1.27
LHX3-201ENST00000371746 MT1AP04731 61 aa7.05□□□□□ -1.28
LHX3-201ENST00000371746 LCE3BQ5TA77 95 aa7.05□□□□□ -1.28
LHX3-201ENST00000371746 SYNE1Q8NF91 8797 aaKnown RBP7.01□□□□□ -1.29
LHX3-201ENST00000371746 NEBP20929 6669 aa6.96□□□□□ -1.29
LHX3-201ENST00000371746 KRTAP9-7A8MTY7 169 aa6.94□□□□□ -1.3
LHX3-201ENST00000371746 KRTAP4-9Q9BYQ8 210 aa6.81□□□□□ -1.32
LHX3-201ENST00000371746 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
LHX3-201ENST00000371746 KRTAP12-4P60329 112 aa6.61□□□□□ -1.35
LHX3-201ENST00000371746 KRTAP5-4Q6L8H1 288 aa6.55□□□□□ -1.36
LHX3-201ENST00000371746 KRTAP6-2Q3LI66 62 aa6.48□□□□□ -1.37
LHX3-201ENST00000371746 LCE3DQ9BYE3 92 aa6.46□□□□□ -1.38
LHX3-201ENST00000371746 MT3P25713 68 aa6.36□□□□□ -1.39
LHX3-201ENST00000371746 MT4P47944 62 aa6.36□□□□□ -1.39
LHX3-201ENST00000371746 KRTAP4-6Q9BYQ5 205 aa6.35□□□□□ -1.39
LHX3-201ENST00000371746 OBSCNQ5VST9 7968 aa6.35□□□□□ -1.39
LHX3-201ENST00000371746 LCE3EQ5T5B0 92 aa6.3□□□□□ -1.4
LHX3-201ENST00000371746 LCE4AQ5TA78 99 aa6.27□□□□□ -1.41
LHX3-201ENST00000371746 KRTAP2-2Q9BYT5 123 aa6.25□□□□□ -1.41
LHX3-201ENST00000371746 HMCN1Q96RW7 5635 aa6.19□□□□□ -1.42
LHX3-201ENST00000371746 KRTAP20-2Q3LI61 65 aa6.16□□□□□ -1.42
LHX3-201ENST00000371746 KRTAP20-1Q3LI63 56 aa6.14□□□□□ -1.43
LHX3-201ENST00000371746 LCE1DQ5T752 114 aa6.11□□□□□ -1.43
LHX3-201ENST00000371746 KRTAP5-2Q701N4 177 aa6□□□□□ -1.45
LHX3-201ENST00000371746 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
LHX3-201ENST00000371746 PRM1P04553 51 aa5.77□□□□□ -1.49
LHX3-201ENST00000371746 LCE1EQ5T753 118 aa5.36□□□□□ -1.55
LHX3-201ENST00000371746 MUC5ACP98088 5654 aa5.31□□□□□ -1.56
LHX3-201ENST00000371746 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
LHX3-201ENST00000371746 LCE1BQ5T7P3 118 aa5.24□□□□□ -1.57
LHX3-201ENST00000371746 KRTAP5-1Q6L8H4 278 aa5.19□□□□□ -1.58
LHX3-201ENST00000371746 AHNAK2Q8IVF2 5795 aa5.18□□□□□ -1.58
LHX3-201ENST00000371746 KRTAP5-10Q6L8G5 202 aa5.11□□□□□ -1.59
LHX3-201ENST00000371746 KRTAP4-2Q9BYR5 136 aa5.1□□□□□ -1.59
LHX3-201ENST00000371746 LCE1CQ5T751 118 aa5.05□□□□□ -1.6
LHX3-201ENST00000371746 KRTAP5-8O75690 187 aa5.04□□□□□ -1.6
LHX3-201ENST00000371746 KRTAP5-7Q6L8G8 165 aa4.85□□□□□ -1.63
LHX3-201ENST00000371746 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.72□□□□□ -1.65
LHX3-201ENST00000371746 KRTAP21-2Q3LI59 83 aa4.62□□□□□ -1.67
LHX3-201ENST00000371746 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
LHX3-201ENST00000371746 MUC5BQ9HC84 5762 aaPredicted RBP4.53□□□□□ -1.68
LHX3-201ENST00000371746 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.7
LHX3-201ENST00000371746 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.7
LHX3-201ENST00000371746 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
LHX3-201ENST00000371746 KRTAP4-4Q9BYR3 166 aa4.22□□□□□ -1.73
LHX3-201ENST00000371746 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
LHX3-201ENST00000371746 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
LHX3-201ENST00000371746 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
LHX3-201ENST00000371746 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
LHX3-201ENST00000371746 KRTAP21-1Q3LI58 79 aa3.6□□□□□ -1.83
LHX3-201ENST00000371746 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 98 ms