RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
EDF1-202ENST00000371648 K7ERS5 55 aa5.36□□□□□ -1.55
EDF1-202ENST00000371648 GPR98Q8WXG9 6306 aa5.34□□□□□ -1.56
EDF1-202ENST00000371648 MT1EP04732 61 aa5.33□□□□□ -1.56
EDF1-202ENST00000371648 KRTAP19-5Q3LI72 72 aa5.33□□□□□ -1.56
EDF1-202ENST00000371648 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
EDF1-202ENST00000371648 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
EDF1-202ENST00000371648 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
EDF1-202ENST00000371648 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
EDF1-202ENST00000371648 A6NED7 52 aa5.28□□□□□ -1.56
EDF1-202ENST00000371648 BRK1Q8WUW1 75 aa5.21□□□□□ -1.58
EDF1-202ENST00000371648 MT1GP13640 62 aa5.19□□□□□ -1.58
EDF1-202ENST00000371648 KRTAP25-1Q3LHN0 102 aa5.18□□□□□ -1.58
EDF1-202ENST00000371648 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
EDF1-202ENST00000371648 PMAIP1Q13794 54 aa5.16□□□□□ -1.58
EDF1-202ENST00000371648 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
EDF1-202ENST00000371648 MT1LQ93083 61 aa5.13□□□□□ -1.59
EDF1-202ENST00000371648 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
EDF1-202ENST00000371648 MT4P47944 62 aa5.08□□□□□ -1.6
EDF1-202ENST00000371648 MT1MQ8N339 61 aa5.07□□□□□ -1.6
EDF1-202ENST00000371648 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
EDF1-202ENST00000371648 LCE4AQ5TA78 99 aa5.06□□□□□ -1.6
EDF1-202ENST00000371648 CDC42SE1Q9NRR8 79 aa5.06□□□□□ -1.6
EDF1-202ENST00000371648 HMCN1Q96RW7 5635 aa5.03□□□□□ -1.6
EDF1-202ENST00000371648 KTN1-AS1Q86SY8 53 aa4.99□□□□□ -1.61
EDF1-202ENST00000371648 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
EDF1-202ENST00000371648 ROMO1P60602 79 aa4.97□□□□□ -1.61
EDF1-202ENST00000371648 KRTAP5-4Q6L8H1 288 aa4.92□□□□□ -1.62
EDF1-202ENST00000371648 AHNAK2Q8IVF2 5795 aa4.92□□□□□ -1.62
EDF1-202ENST00000371648 KRTAP4-7Q9BYR0 210 aa4.91□□□□□ -1.62
EDF1-202ENST00000371648 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
EDF1-202ENST00000371648 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.63
EDF1-202ENST00000371648 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
EDF1-202ENST00000371648 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
EDF1-202ENST00000371648 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
EDF1-202ENST00000371648 KRTAP4-12Q9BQ66 201 aa4.79□□□□□ -1.64
EDF1-202ENST00000371648 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
EDF1-202ENST00000371648 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
EDF1-202ENST00000371648 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
EDF1-202ENST00000371648 KRTAP5-7Q6L8G8 165 aa4.68□□□□□ -1.66
EDF1-202ENST00000371648 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
EDF1-202ENST00000371648 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
EDF1-202ENST00000371648 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
EDF1-202ENST00000371648 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
EDF1-202ENST00000371648 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.68
EDF1-202ENST00000371648 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
EDF1-202ENST00000371648 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
EDF1-202ENST00000371648 MT1AP04731 61 aa4.37□□□□□ -1.71
EDF1-202ENST00000371648 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
EDF1-202ENST00000371648 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
EDF1-202ENST00000371648 KRTAP5-2Q701N4 177 aa4.28□□□□□ -1.72
EDF1-202ENST00000371648 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
EDF1-202ENST00000371648 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
EDF1-202ENST00000371648 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.75
EDF1-202ENST00000371648 AHNAKQ09666 5890 aaKnown RBP4.09□□□□□ -1.75
EDF1-202ENST00000371648 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
EDF1-202ENST00000371648 MT3P25713 68 aa4.06□□□□□ -1.76
EDF1-202ENST00000371648 MUC5BQ9HC84 5762 aaPredicted RBP4.05□□□□□ -1.76
EDF1-202ENST00000371648 LUZP6Q538Z0 58 aa3.93□□□□□ -1.78
EDF1-202ENST00000371648 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
EDF1-202ENST00000371648 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
EDF1-202ENST00000371648 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
EDF1-202ENST00000371648 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
EDF1-202ENST00000371648 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
EDF1-202ENST00000371648 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
EDF1-202ENST00000371648 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
EDF1-202ENST00000371648 INE1O15225 51 aa3.36□□□□□ -1.87
EDF1-202ENST00000371648 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
EDF1-202ENST00000371648 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
EDF1-202ENST00000371648 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
EDF1-202ENST00000371648 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
EDF1-202ENST00000371648 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
EDF1-202ENST00000371648 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
EDF1-202ENST00000371648 PRM1P04553 51 aa2.55□□□□□ -2
EDF1-202ENST00000371648 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
EDF1-202ENST00000371648 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
EDF1-202ENST00000371648 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 191.4 ms