RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

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Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 KRTAP19-5Q3LI72 72 aa5.6□□□□□ -1.51
SS18L1-202ENST00000370848 TNP1P09430 55 aa5.56□□□□□ -1.52
SS18L1-202ENST00000370848 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
SS18L1-202ENST00000370848 A6NED7 52 aa5.53□□□□□ -1.52
SS18L1-202ENST00000370848 K7ERS5 55 aa5.52□□□□□ -1.53
SS18L1-202ENST00000370848 KRTAP4-9Q9BYQ8 210 aa5.51□□□□□ -1.53
SS18L1-202ENST00000370848 MT1GP13640 62 aa5.46□□□□□ -1.54
SS18L1-202ENST00000370848 HMCN1Q96RW7 5635 aa5.44□□□□□ -1.54
SS18L1-202ENST00000370848 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
SS18L1-202ENST00000370848 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
SS18L1-202ENST00000370848 MT1LQ93083 61 aa5.4□□□□□ -1.54
SS18L1-202ENST00000370848 CDC42SE1Q9NRR8 79 aa5.4□□□□□ -1.54
SS18L1-202ENST00000370848 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
SS18L1-202ENST00000370848 MT1MQ8N339 61 aa5.35□□□□□ -1.55
SS18L1-202ENST00000370848 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
SS18L1-202ENST00000370848 KRTAP5-4Q6L8H1 288 aa5.32□□□□□ -1.56
SS18L1-202ENST00000370848 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
SS18L1-202ENST00000370848 AHNAK2Q8IVF2 5795 aa5.29□□□□□ -1.56
SS18L1-202ENST00000370848 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
SS18L1-202ENST00000370848 MT4P47944 62 aa5.26□□□□□ -1.57
SS18L1-202ENST00000370848 KRTAP5-10Q6L8G5 202 aa5.22□□□□□ -1.57
SS18L1-202ENST00000370848 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
SS18L1-202ENST00000370848 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
SS18L1-202ENST00000370848 ROMO1P60602 79 aa5.18□□□□□ -1.58
SS18L1-202ENST00000370848 BRK1Q8WUW1 75 aa5.09□□□□□ -1.59
SS18L1-202ENST00000370848 KRTAP9-9Q9BYP9 154 aa5.07□□□□□ -1.6
SS18L1-202ENST00000370848 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
SS18L1-202ENST00000370848 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
SS18L1-202ENST00000370848 KRTAP5-3Q6L8H2 238 aa5.01□□□□□ -1.61
SS18L1-202ENST00000370848 KRTAP5-5Q701N2 237 aaPredicted RBP5.01□□□□□ -1.61
SS18L1-202ENST00000370848 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
SS18L1-202ENST00000370848 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
SS18L1-202ENST00000370848 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
SS18L1-202ENST00000370848 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
SS18L1-202ENST00000370848 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
SS18L1-202ENST00000370848 LCE3CQ5T5A8 94 aa4.89□□□□□ -1.63
SS18L1-202ENST00000370848 PMAIP1Q13794 54 aa4.84□□□□□ -1.63
SS18L1-202ENST00000370848 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
SS18L1-202ENST00000370848 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
SS18L1-202ENST00000370848 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
SS18L1-202ENST00000370848 KRTAP4-2Q9BYR5 136 aa4.71□□□□□ -1.66
SS18L1-202ENST00000370848 KRTAP9-6A8MVA2 160 aa4.68□□□□□ -1.66
SS18L1-202ENST00000370848 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
SS18L1-202ENST00000370848 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
SS18L1-202ENST00000370848 MT1AP04731 61 aa4.58□□□□□ -1.68
SS18L1-202ENST00000370848 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
SS18L1-202ENST00000370848 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
SS18L1-202ENST00000370848 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
SS18L1-202ENST00000370848 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
SS18L1-202ENST00000370848 KRTAP5-8O75690 187 aa4.47□□□□□ -1.69
SS18L1-202ENST00000370848 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
SS18L1-202ENST00000370848 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
SS18L1-202ENST00000370848 AHNAKQ09666 5890 aaKnown RBP4.4□□□□□ -1.7
SS18L1-202ENST00000370848 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
SS18L1-202ENST00000370848 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
SS18L1-202ENST00000370848 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
SS18L1-202ENST00000370848 MT3P25713 68 aa4.16□□□□□ -1.74
SS18L1-202ENST00000370848 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
SS18L1-202ENST00000370848 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
SS18L1-202ENST00000370848 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
SS18L1-202ENST00000370848 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
SS18L1-202ENST00000370848 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
SS18L1-202ENST00000370848 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
SS18L1-202ENST00000370848 NDUFAF8A1L188 74 aa3.33□□□□□ -1.88
SS18L1-202ENST00000370848 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
SS18L1-202ENST00000370848 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
SS18L1-202ENST00000370848 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
SS18L1-202ENST00000370848 H3BS24 57 aa3.15□□□□□ -1.91
SS18L1-202ENST00000370848 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
SS18L1-202ENST00000370848 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
SS18L1-202ENST00000370848 A0A0A0MQY5 61 aa2.88□□□□□ -1.95
SS18L1-202ENST00000370848 INE1O15225 51 aa2.85□□□□□ -1.95
SS18L1-202ENST00000370848 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
SS18L1-202ENST00000370848 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
SS18L1-202ENST00000370848 PRM1P04553 51 aa2.66□□□□□ -1.98
SS18L1-202ENST00000370848 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
SS18L1-202ENST00000370848 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 23.3 ms