RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
CDR1-201ENST00000370532 KRTAP19-6Q3LI70 58 aa1.99□□□□□ -2.09
CDR1-201ENST00000370532 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
CDR1-201ENST00000370532 KRTAP10-7P60409 375 aaPredicted RBP1.96□□□□□ -2.1
CDR1-201ENST00000370532 MT1FP04733 61 aa1.95□□□□□ -2.1
CDR1-201ENST00000370532 LCE3CQ5T5A8 94 aa1.95□□□□□ -2.1
CDR1-201ENST00000370532 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
CDR1-201ENST00000370532 KRTAP10-10P60014 251 aa1.94□□□□□ -2.1
CDR1-201ENST00000370532 SSPOA2VEC9 5147 aa1.9□□□□□ -2.11
CDR1-201ENST00000370532 FSIP2Q5CZC0 6907 aa1.9□□□□□ -2.11
CDR1-201ENST00000370532 KRTAP5-2Q701N4 177 aa1.89□□□□□ -2.11
CDR1-201ENST00000370532 USH2AO75445 5202 aa1.88□□□□□ -2.11
CDR1-201ENST00000370532 KRTAP19-8Q3LI54 63 aa1.88□□□□□ -2.11
CDR1-201ENST00000370532 KRTAP10-12P60413 245 aa1.86□□□□□ -2.11
CDR1-201ENST00000370532 SPRR2GQ9BYE4 73 aa1.86□□□□□ -2.11
CDR1-201ENST00000370532 TNP1P09430 55 aa1.85□□□□□ -2.11
CDR1-201ENST00000370532 FCGBPQ9Y6R7 5405 aaPredicted RBP1.84□□□□□ -2.12
CDR1-201ENST00000370532 KRTAP10-5P60370 271 aa1.83□□□□□ -2.12
CDR1-201ENST00000370532 LCE3EQ5T5B0 92 aa1.81□□□□□ -2.12
CDR1-201ENST00000370532 MT1BP07438 61 aa1.81□□□□□ -2.12
CDR1-201ENST00000370532 MT3P25713 68 aa1.8□□□□□ -2.12
CDR1-201ENST00000370532 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
CDR1-201ENST00000370532 KRTAP20-1Q3LI63 56 aa1.79□□□□□ -2.12
CDR1-201ENST00000370532 LCE1EQ5T753 118 aa1.78□□□□□ -2.12
CDR1-201ENST00000370532 NEBP20929 6669 aa1.76□□□□□ -2.13
CDR1-201ENST00000370532 KRTAP2-3P0C7H8 128 aa1.76□□□□□ -2.13
CDR1-201ENST00000370532 KRTAP2-4Q9BYR9 128 aa1.76□□□□□ -2.13
CDR1-201ENST00000370532 LCE3AQ5TA76 89 aa1.75□□□□□ -2.13
CDR1-201ENST00000370532 MACF1Q9UPN3 7388 aaKnown RBP1.72□□□□□ -2.13
CDR1-201ENST00000370532 KRTAP8-1Q8IUC2 63 aa1.71□□□□□ -2.14
CDR1-201ENST00000370532 KRTAP4-3Q9BYR4 195 aa1.71□□□□□ -2.14
CDR1-201ENST00000370532 MT1XP80297 61 aa1.69□□□□□ -2.14
CDR1-201ENST00000370532 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
CDR1-201ENST00000370532 SPRR2EP22531 72 aa1.66□□□□□ -2.14
CDR1-201ENST00000370532 SPRR2BP35325 72 aa1.66□□□□□ -2.14
CDR1-201ENST00000370532 SPRR2AP35326 72 aa1.66□□□□□ -2.14
CDR1-201ENST00000370532 SYNE2Q8WXH0 6885 aaKnown RBP1.65□□□□□ -2.14
CDR1-201ENST00000370532 SPRR2FQ96RM1 72 aa1.64□□□□□ -2.15
CDR1-201ENST00000370532 KMT2DO14686 5537 aa1.63□□□□□ -2.15
CDR1-201ENST00000370532 SPRR2DP22532 72 aa1.62□□□□□ -2.15
CDR1-201ENST00000370532 KRTAP12-3P60328 96 aa1.62□□□□□ -2.15
CDR1-201ENST00000370532 MUC12Q9UKN1 5478 aa1.61□□□□□ -2.15
CDR1-201ENST00000370532 KRTAP9-6A8MVA2 160 aa1.6□□□□□ -2.15
CDR1-201ENST00000370532 MDN1Q9NU22 5596 aa1.57□□□□□ -2.16
CDR1-201ENST00000370532 LCE3DQ9BYE3 92 aa1.54□□□□□ -2.16
CDR1-201ENST00000370532 KRTAP19-5Q3LI72 72 aa1.52□□□□□ -2.17
CDR1-201ENST00000370532 KRTAP19-3Q7Z4W3 81 aa1.52□□□□□ -2.17
CDR1-201ENST00000370532 MT1GP13640 62 aa1.51□□□□□ -2.17
CDR1-201ENST00000370532 KRTAP19-7Q3SYF9 63 aa1.51□□□□□ -2.17
CDR1-201ENST00000370532 MT1EP04732 61 aa1.5□□□□□ -2.17
CDR1-201ENST00000370532 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
CDR1-201ENST00000370532 OBSCNQ5VST9 7968 aa1.47□□□□□ -2.17
CDR1-201ENST00000370532 MT1LQ93083 61 aa1.44□□□□□ -2.18
CDR1-201ENST00000370532 GPR98Q8WXG9 6306 aa1.44□□□□□ -2.18
CDR1-201ENST00000370532 MT1MQ8N339 61 aa1.44□□□□□ -2.18
CDR1-201ENST00000370532 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
CDR1-201ENST00000370532 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
CDR1-201ENST00000370532 DSTQ03001 7570 aaKnown RBP1.41□□□□□ -2.18
CDR1-201ENST00000370532 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.19
CDR1-201ENST00000370532 PRM1P04553 51 aa1.38□□□□□ -2.19
CDR1-201ENST00000370532 AHNAK2Q8IVF2 5795 aa1.36□□□□□ -2.19
CDR1-201ENST00000370532 KRTAP5-5Q701N2 237 aaPredicted RBP1.35□□□□□ -2.19
CDR1-201ENST00000370532 SYNE1Q8NF91 8797 aaKnown RBP1.34□□□□□ -2.19
CDR1-201ENST00000370532 MT4P47944 62 aa1.33□□□□□ -2.2
CDR1-201ENST00000370532 KRTAP20-2Q3LI61 65 aa1.33□□□□□ -2.2
CDR1-201ENST00000370532 MT1AP04731 61 aa1.3□□□□□ -2.2
CDR1-201ENST00000370532 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
CDR1-201ENST00000370532 KRTAP6-2Q3LI66 62 aa1.23□□□□□ -2.21
CDR1-201ENST00000370532 KRTAP6-1Q3LI64 71 aa1.22□□□□□ -2.21
CDR1-201ENST00000370532 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
CDR1-201ENST00000370532 MUC19Q7Z5P9 8384 aa1.11□□□□□ -2.23
CDR1-201ENST00000370532 LCE1CQ5T751 118 aa1.08□□□□□ -2.24
CDR1-201ENST00000370532 LCE1BQ5T7P3 118 aa1.08□□□□□ -2.24
CDR1-201ENST00000370532 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
CDR1-201ENST00000370532 KRTAP21-2Q3LI59 83 aa0.83□□□□□ -2.28
CDR1-201ENST00000370532 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
CDR1-201ENST00000370532 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 70.5 ms