RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
CDR1-201ENST00000370532 KRTAP19-6Q3LI70 58 aa1.99□□□□□ -2.09
CDR1-201ENST00000370532 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
CDR1-201ENST00000370532 KRTAP10-7P60409 375 aaPredicted RBP1.96□□□□□ -2.1
CDR1-201ENST00000370532 MT1FP04733 61 aa1.95□□□□□ -2.1
CDR1-201ENST00000370532 LCE3CQ5T5A8 94 aa1.95□□□□□ -2.1
CDR1-201ENST00000370532 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
CDR1-201ENST00000370532 KRTAP10-10P60014 251 aa1.94□□□□□ -2.1
CDR1-201ENST00000370532 SSPOA2VEC9 5147 aa1.9□□□□□ -2.11
CDR1-201ENST00000370532 FSIP2Q5CZC0 6907 aa1.9□□□□□ -2.11
CDR1-201ENST00000370532 KRTAP5-2Q701N4 177 aa1.89□□□□□ -2.11
CDR1-201ENST00000370532 USH2AO75445 5202 aa1.88□□□□□ -2.11
CDR1-201ENST00000370532 KRTAP19-8Q3LI54 63 aa1.88□□□□□ -2.11
CDR1-201ENST00000370532 KRTAP10-12P60413 245 aa1.86□□□□□ -2.11
CDR1-201ENST00000370532 SPRR2GQ9BYE4 73 aa1.86□□□□□ -2.11
CDR1-201ENST00000370532 TNP1P09430 55 aa1.85□□□□□ -2.11
CDR1-201ENST00000370532 FCGBPQ9Y6R7 5405 aaPredicted RBP1.84□□□□□ -2.12
CDR1-201ENST00000370532 KRTAP10-5P60370 271 aa1.83□□□□□ -2.12
CDR1-201ENST00000370532 LCE3EQ5T5B0 92 aa1.81□□□□□ -2.12
CDR1-201ENST00000370532 MT1BP07438 61 aa1.81□□□□□ -2.12
CDR1-201ENST00000370532 MT3P25713 68 aa1.8□□□□□ -2.12
CDR1-201ENST00000370532 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
CDR1-201ENST00000370532 KRTAP20-1Q3LI63 56 aa1.79□□□□□ -2.12
CDR1-201ENST00000370532 LCE1EQ5T753 118 aa1.78□□□□□ -2.12
CDR1-201ENST00000370532 NEBP20929 6669 aa1.76□□□□□ -2.13
CDR1-201ENST00000370532 KRTAP2-3P0C7H8 128 aa1.76□□□□□ -2.13
CDR1-201ENST00000370532 KRTAP2-4Q9BYR9 128 aa1.76□□□□□ -2.13
CDR1-201ENST00000370532 LCE3AQ5TA76 89 aa1.75□□□□□ -2.13
CDR1-201ENST00000370532 MACF1Q9UPN3 7388 aaKnown RBP1.72□□□□□ -2.13
CDR1-201ENST00000370532 KRTAP8-1Q8IUC2 63 aa1.71□□□□□ -2.14
CDR1-201ENST00000370532 KRTAP4-3Q9BYR4 195 aa1.71□□□□□ -2.14
CDR1-201ENST00000370532 MT1XP80297 61 aa1.69□□□□□ -2.14
CDR1-201ENST00000370532 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
CDR1-201ENST00000370532 SPRR2EP22531 72 aa1.66□□□□□ -2.14
CDR1-201ENST00000370532 SPRR2BP35325 72 aa1.66□□□□□ -2.14
CDR1-201ENST00000370532 SPRR2AP35326 72 aa1.66□□□□□ -2.14
CDR1-201ENST00000370532 SYNE2Q8WXH0 6885 aaKnown RBP1.65□□□□□ -2.14
CDR1-201ENST00000370532 SPRR2FQ96RM1 72 aa1.64□□□□□ -2.15
CDR1-201ENST00000370532 KMT2DO14686 5537 aa1.63□□□□□ -2.15
CDR1-201ENST00000370532 SPRR2DP22532 72 aa1.62□□□□□ -2.15
CDR1-201ENST00000370532 KRTAP12-3P60328 96 aa1.62□□□□□ -2.15
CDR1-201ENST00000370532 MUC12Q9UKN1 5478 aa1.61□□□□□ -2.15
CDR1-201ENST00000370532 KRTAP9-6A8MVA2 160 aa1.6□□□□□ -2.15
CDR1-201ENST00000370532 MDN1Q9NU22 5596 aa1.57□□□□□ -2.16
CDR1-201ENST00000370532 LCE3DQ9BYE3 92 aa1.54□□□□□ -2.16
CDR1-201ENST00000370532 KRTAP19-5Q3LI72 72 aa1.52□□□□□ -2.17
CDR1-201ENST00000370532 KRTAP19-3Q7Z4W3 81 aa1.52□□□□□ -2.17
CDR1-201ENST00000370532 MT1GP13640 62 aa1.51□□□□□ -2.17
CDR1-201ENST00000370532 KRTAP19-7Q3SYF9 63 aa1.51□□□□□ -2.17
CDR1-201ENST00000370532 MT1EP04732 61 aa1.5□□□□□ -2.17
CDR1-201ENST00000370532 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
CDR1-201ENST00000370532 OBSCNQ5VST9 7968 aa1.47□□□□□ -2.17
CDR1-201ENST00000370532 MT1LQ93083 61 aa1.44□□□□□ -2.18
CDR1-201ENST00000370532 GPR98Q8WXG9 6306 aa1.44□□□□□ -2.18
CDR1-201ENST00000370532 MT1MQ8N339 61 aa1.44□□□□□ -2.18
CDR1-201ENST00000370532 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
CDR1-201ENST00000370532 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
CDR1-201ENST00000370532 DSTQ03001 7570 aaKnown RBP1.41□□□□□ -2.18
CDR1-201ENST00000370532 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.19
CDR1-201ENST00000370532 PRM1P04553 51 aa1.38□□□□□ -2.19
CDR1-201ENST00000370532 AHNAK2Q8IVF2 5795 aa1.36□□□□□ -2.19
CDR1-201ENST00000370532 KRTAP5-5Q701N2 237 aaPredicted RBP1.35□□□□□ -2.19
CDR1-201ENST00000370532 SYNE1Q8NF91 8797 aaKnown RBP1.34□□□□□ -2.19
CDR1-201ENST00000370532 MT4P47944 62 aa1.33□□□□□ -2.2
CDR1-201ENST00000370532 KRTAP20-2Q3LI61 65 aa1.33□□□□□ -2.2
CDR1-201ENST00000370532 MT1AP04731 61 aa1.3□□□□□ -2.2
CDR1-201ENST00000370532 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
CDR1-201ENST00000370532 KRTAP6-2Q3LI66 62 aa1.23□□□□□ -2.21
CDR1-201ENST00000370532 KRTAP6-1Q3LI64 71 aa1.22□□□□□ -2.21
CDR1-201ENST00000370532 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
CDR1-201ENST00000370532 MUC19Q7Z5P9 8384 aa1.11□□□□□ -2.23
CDR1-201ENST00000370532 LCE1CQ5T751 118 aa1.08□□□□□ -2.24
CDR1-201ENST00000370532 LCE1BQ5T7P3 118 aa1.08□□□□□ -2.24
CDR1-201ENST00000370532 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
CDR1-201ENST00000370532 KRTAP21-2Q3LI59 83 aa0.83□□□□□ -2.28
CDR1-201ENST00000370532 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
CDR1-201ENST00000370532 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 80.9 ms