RNA–Protein interactions for RNA: ENST00000370214.8

ABCD3-202, Transcript of ATP binding cassette subfamily D member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD3, Length 3,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-202ENST00000370214 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
ABCD3-202ENST00000370214 KRTAP9-3Q9BYQ3 159 aa2.81□□□□□ -1.96
ABCD3-202ENST00000370214 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
ABCD3-202ENST00000370214 MUC12Q9UKN1 5478 aa2.79□□□□□ -1.96
ABCD3-202ENST00000370214 KRTAP19-8Q3LI54 63 aa2.78□□□□□ -1.96
ABCD3-202ENST00000370214 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
ABCD3-202ENST00000370214 CRCT1Q9UGL9 99 aa2.78□□□□□ -1.96
ABCD3-202ENST00000370214 PRO2289Q9P1D8 64 aa2.76□□□□□ -1.97
ABCD3-202ENST00000370214 SSPOA2VEC9 5147 aa2.73□□□□□ -1.97
ABCD3-202ENST00000370214 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
ABCD3-202ENST00000370214 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.98
ABCD3-202ENST00000370214 LCE3CQ5T5A8 94 aa2.65□□□□□ -1.99
ABCD3-202ENST00000370214 LCE4AQ5TA78 99 aa2.64□□□□□ -1.99
ABCD3-202ENST00000370214 SYNE2Q8WXH0 6885 aaKnown RBP2.64□□□□□ -1.99
ABCD3-202ENST00000370214 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
ABCD3-202ENST00000370214 KRTAP9-7A8MTY7 169 aa2.61□□□□□ -1.99
ABCD3-202ENST00000370214 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
ABCD3-202ENST00000370214 MT1GP13640 62 aa2.54□□□□□ -2
ABCD3-202ENST00000370214 KRTAP19-4Q3LI73 84 aa2.54□□□□□ -2
ABCD3-202ENST00000370214 MACF1Q9UPN3 7388 aaKnown RBP2.53□□□□□ -2
ABCD3-202ENST00000370214 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
ABCD3-202ENST00000370214 MDN1Q9NU22 5596 aa2.5□□□□□ -2.01
ABCD3-202ENST00000370214 MT1LQ93083 61 aa2.49□□□□□ -2.01
ABCD3-202ENST00000370214 INE1O15225 51 aa2.48□□□□□ -2.01
ABCD3-202ENST00000370214 MT1EP04732 61 aa2.48□□□□□ -2.01
ABCD3-202ENST00000370214 SPRR2FQ96RM1 72 aa2.44□□□□□ -2.02
ABCD3-202ENST00000370214 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
ABCD3-202ENST00000370214 KRTAP2-3P0C7H8 128 aa2.34□□□□□ -2.03
ABCD3-202ENST00000370214 KRTAP19-6Q3LI70 58 aa2.34□□□□□ -2.03
ABCD3-202ENST00000370214 LCE5AQ5TCM9 118 aa2.34□□□□□ -2.03
ABCD3-202ENST00000370214 KRTAP2-4Q9BYR9 128 aa2.34□□□□□ -2.03
ABCD3-202ENST00000370214 KRTAP2-1Q9BYU5 128 aa2.34□□□□□ -2.03
ABCD3-202ENST00000370214 KRTAP12-4P60329 112 aa2.34□□□□□ -2.04
ABCD3-202ENST00000370214 MT1MQ8N339 61 aa2.34□□□□□ -2.04
ABCD3-202ENST00000370214 KRTAP6-3Q3LI67 103 aa2.31□□□□□ -2.04
ABCD3-202ENST00000370214 KRTAP19-3Q7Z4W3 81 aa2.31□□□□□ -2.04
ABCD3-202ENST00000370214 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
ABCD3-202ENST00000370214 KRTAP20-1Q3LI63 56 aa2.3□□□□□ -2.04
ABCD3-202ENST00000370214 SPRR2EP22531 72 aa2.21□□□□□ -2.06
ABCD3-202ENST00000370214 SPRR2BP35325 72 aa2.21□□□□□ -2.06
ABCD3-202ENST00000370214 SPRR2AP35326 72 aa2.21□□□□□ -2.06
ABCD3-202ENST00000370214 KRTAP6-1Q3LI64 71 aa2.21□□□□□ -2.06
ABCD3-202ENST00000370214 NEBP20929 6669 aa2.19□□□□□ -2.06
ABCD3-202ENST00000370214 SPRR2DP22532 72 aa2.13□□□□□ -2.07
ABCD3-202ENST00000370214 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
ABCD3-202ENST00000370214 KRTAP2-2Q9BYT5 123 aa2.11□□□□□ -2.07
ABCD3-202ENST00000370214 KRTAP5-4Q6L8H1 288 aa2.1□□□□□ -2.07
ABCD3-202ENST00000370214 LCE1AQ5T7P2 110 aa2.09□□□□□ -2.07
ABCD3-202ENST00000370214 PRM1P04553 51 aa2.08□□□□□ -2.08
ABCD3-202ENST00000370214 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
ABCD3-202ENST00000370214 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
ABCD3-202ENST00000370214 MT1AP04731 61 aa2.03□□□□□ -2.09
ABCD3-202ENST00000370214 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
ABCD3-202ENST00000370214 KRTAP6-2Q3LI66 62 aa2.01□□□□□ -2.09
ABCD3-202ENST00000370214 MT4P47944 62 aa1.99□□□□□ -2.09
ABCD3-202ENST00000370214 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
ABCD3-202ENST00000370214 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
ABCD3-202ENST00000370214 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
ABCD3-202ENST00000370214 MT3P25713 68 aa1.86□□□□□ -2.11
ABCD3-202ENST00000370214 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
ABCD3-202ENST00000370214 LCE1EQ5T753 118 aa1.82□□□□□ -2.12
ABCD3-202ENST00000370214 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
ABCD3-202ENST00000370214 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.13
ABCD3-202ENST00000370214 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
ABCD3-202ENST00000370214 MUC5ACP98088 5654 aa1.76□□□□□ -2.13
ABCD3-202ENST00000370214 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
ABCD3-202ENST00000370214 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
ABCD3-202ENST00000370214 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
ABCD3-202ENST00000370214 KRTAP20-2Q3LI61 65 aa1.67□□□□□ -2.14
ABCD3-202ENST00000370214 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
ABCD3-202ENST00000370214 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
ABCD3-202ENST00000370214 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
ABCD3-202ENST00000370214 LCE1CQ5T751 118 aa1.4□□□□□ -2.18
ABCD3-202ENST00000370214 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
ABCD3-202ENST00000370214 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
ABCD3-202ENST00000370214 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
ABCD3-202ENST00000370214 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms