RNA–Protein interactions for RNA: ENST00000369452.8

SHOC2-202, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOC2, Length 3,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-202ENST00000369452 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
SHOC2-202ENST00000369452 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
SHOC2-202ENST00000369452 H3BS24 57 aa4.47□□□□□ -1.69
SHOC2-202ENST00000369452 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.7
SHOC2-202ENST00000369452 SPRR2FQ96RM1 72 aa4.44□□□□□ -1.7
SHOC2-202ENST00000369452 LUZP6Q538Z0 58 aa4.43□□□□□ -1.7
SHOC2-202ENST00000369452 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
SHOC2-202ENST00000369452 MT1MQ8N339 61 aa4.4□□□□□ -1.71
SHOC2-202ENST00000369452 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
SHOC2-202ENST00000369452 MT1GP13640 62 aa4.33□□□□□ -1.72
SHOC2-202ENST00000369452 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
SHOC2-202ENST00000369452 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
SHOC2-202ENST00000369452 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
SHOC2-202ENST00000369452 KRTAP9-6A0A140TA67 174 aa4.19□□□□□ -1.74
SHOC2-202ENST00000369452 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
SHOC2-202ENST00000369452 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
SHOC2-202ENST00000369452 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
SHOC2-202ENST00000369452 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
SHOC2-202ENST00000369452 SPRR2EP22531 72 aa4.12□□□□□ -1.75
SHOC2-202ENST00000369452 SPRR2BP35325 72 aa4.12□□□□□ -1.75
SHOC2-202ENST00000369452 SPRR2AP35326 72 aa4.12□□□□□ -1.75
SHOC2-202ENST00000369452 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
SHOC2-202ENST00000369452 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
SHOC2-202ENST00000369452 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
SHOC2-202ENST00000369452 NEBP20929 6669 aa4□□□□□ -1.77
SHOC2-202ENST00000369452 KRTAP6-1Q3LI64 71 aa3.98□□□□□ -1.77
SHOC2-202ENST00000369452 SPRR2DP22532 72 aa3.93□□□□□ -1.78
SHOC2-202ENST00000369452 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
SHOC2-202ENST00000369452 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
SHOC2-202ENST00000369452 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
SHOC2-202ENST00000369452 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
SHOC2-202ENST00000369452 MT1AP04731 61 aa3.82□□□□□ -1.8
SHOC2-202ENST00000369452 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
SHOC2-202ENST00000369452 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
SHOC2-202ENST00000369452 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
SHOC2-202ENST00000369452 INE1O15225 51 aa3.65□□□□□ -1.83
SHOC2-202ENST00000369452 KRTAP4-6Q9BYQ5 205 aa3.64□□□□□ -1.83
SHOC2-202ENST00000369452 HMCN1Q96RW7 5635 aa3.62□□□□□ -1.83
SHOC2-202ENST00000369452 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
SHOC2-202ENST00000369452 MT4P47944 62 aa3.55□□□□□ -1.84
SHOC2-202ENST00000369452 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
SHOC2-202ENST00000369452 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
SHOC2-202ENST00000369452 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
SHOC2-202ENST00000369452 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
SHOC2-202ENST00000369452 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
SHOC2-202ENST00000369452 MT3P25713 68 aa3.38□□□□□ -1.87
SHOC2-202ENST00000369452 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
SHOC2-202ENST00000369452 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
SHOC2-202ENST00000369452 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
SHOC2-202ENST00000369452 KRTAP5-3Q6L8H2 238 aa3.34□□□□□ -1.87
SHOC2-202ENST00000369452 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
SHOC2-202ENST00000369452 PRM1P04553 51 aa3.12□□□□□ -1.91
SHOC2-202ENST00000369452 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
SHOC2-202ENST00000369452 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
SHOC2-202ENST00000369452 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
SHOC2-202ENST00000369452 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
SHOC2-202ENST00000369452 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
SHOC2-202ENST00000369452 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
SHOC2-202ENST00000369452 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
SHOC2-202ENST00000369452 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
SHOC2-202ENST00000369452 KRTAP5-10Q6L8G5 202 aa2.86□□□□□ -1.95
SHOC2-202ENST00000369452 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
SHOC2-202ENST00000369452 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
SHOC2-202ENST00000369452 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
SHOC2-202ENST00000369452 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
SHOC2-202ENST00000369452 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
SHOC2-202ENST00000369452 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
SHOC2-202ENST00000369452 KRTAP4-12Q9BQ66 201 aa2.49□□□□□ -2.01
SHOC2-202ENST00000369452 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
SHOC2-202ENST00000369452 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
SHOC2-202ENST00000369452 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
SHOC2-202ENST00000369452 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
SHOC2-202ENST00000369452 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
SHOC2-202ENST00000369452 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
SHOC2-202ENST00000369452 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
SHOC2-202ENST00000369452 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
SHOC2-202ENST00000369452 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 117.2 ms