RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 MT1LQ93083 61 aa6.2□□□□□ -1.42
PRDM1-202ENST00000369091 KRTAP9-6A0A140TA67 174 aa6.19□□□□□ -1.42
PRDM1-202ENST00000369091 KRTAP12-4P60329 112 aa6.14□□□□□ -1.43
PRDM1-202ENST00000369091 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
PRDM1-202ENST00000369091 MT1EP04732 61 aa6.09□□□□□ -1.43
PRDM1-202ENST00000369091 MACF1Q9UPN3 7388 aaKnown RBP6.05□□□□□ -1.44
PRDM1-202ENST00000369091 SYNE2Q8WXH0 6885 aaKnown RBP6.01□□□□□ -1.45
PRDM1-202ENST00000369091 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
PRDM1-202ENST00000369091 KRTAP4-3Q9BYR4 195 aa6.01□□□□□ -1.45
PRDM1-202ENST00000369091 MT1GP13640 62 aa5.95□□□□□ -1.46
PRDM1-202ENST00000369091 KRTAP19-6Q3LI70 58 aa5.94□□□□□ -1.46
PRDM1-202ENST00000369091 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.8□□□□□ -1.48
PRDM1-202ENST00000369091 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
PRDM1-202ENST00000369091 MUC12Q9UKN1 5478 aa5.73□□□□□ -1.49
PRDM1-202ENST00000369091 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
PRDM1-202ENST00000369091 MT1MQ8N339 61 aa5.65□□□□□ -1.5
PRDM1-202ENST00000369091 KRTAP9-7A8MTY7 169 aa5.63□□□□□ -1.51
PRDM1-202ENST00000369091 MDN1Q9NU22 5596 aa5.63□□□□□ -1.51
PRDM1-202ENST00000369091 PRM1P04553 51 aa5.56□□□□□ -1.52
PRDM1-202ENST00000369091 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
PRDM1-202ENST00000369091 KRTAP19-3Q7Z4W3 81 aa5.53□□□□□ -1.52
PRDM1-202ENST00000369091 DSTQ03001 7570 aaKnown RBP5.52□□□□□ -1.53
PRDM1-202ENST00000369091 KRTAP5-5Q701N2 237 aaPredicted RBP5.5□□□□□ -1.53
PRDM1-202ENST00000369091 LCE3DQ9BYE3 92 aa5.42□□□□□ -1.54
PRDM1-202ENST00000369091 MT1AP04731 61 aa5.42□□□□□ -1.54
PRDM1-202ENST00000369091 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.54
PRDM1-202ENST00000369091 LCE3EQ5T5B0 92 aa5.39□□□□□ -1.55
PRDM1-202ENST00000369091 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
PRDM1-202ENST00000369091 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
PRDM1-202ENST00000369091 NEBP20929 6669 aa5.32□□□□□ -1.56
PRDM1-202ENST00000369091 KRTAP5-9P26371 169 aa5.31□□□□□ -1.56
PRDM1-202ENST00000369091 LCE5AQ5TCM9 118 aa5.24□□□□□ -1.57
PRDM1-202ENST00000369091 KRTAP6-2Q3LI66 62 aa5.18□□□□□ -1.58
PRDM1-202ENST00000369091 SPRR2EP22531 72 aa5.17□□□□□ -1.58
PRDM1-202ENST00000369091 SPRR2BP35325 72 aa5.17□□□□□ -1.58
PRDM1-202ENST00000369091 SPRR2AP35326 72 aa5.17□□□□□ -1.58
PRDM1-202ENST00000369091 LCE1AQ5T7P2 110 aa5.14□□□□□ -1.59
PRDM1-202ENST00000369091 KRTAP2-2Q9BYT5 123 aa5.01□□□□□ -1.61
PRDM1-202ENST00000369091 SPRR2DP22532 72 aa4.97□□□□□ -1.61
PRDM1-202ENST00000369091 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.62
PRDM1-202ENST00000369091 OBSCNQ5VST9 7968 aa4.89□□□□□ -1.63
PRDM1-202ENST00000369091 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
PRDM1-202ENST00000369091 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
PRDM1-202ENST00000369091 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
PRDM1-202ENST00000369091 MT3P25713 68 aa4.54□□□□□ -1.68
PRDM1-202ENST00000369091 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
PRDM1-202ENST00000369091 MT4P47944 62 aa4.45□□□□□ -1.7
PRDM1-202ENST00000369091 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
PRDM1-202ENST00000369091 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
PRDM1-202ENST00000369091 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
PRDM1-202ENST00000369091 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
PRDM1-202ENST00000369091 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
PRDM1-202ENST00000369091 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.75
PRDM1-202ENST00000369091 MUC5ACP98088 5654 aa4.09□□□□□ -1.75
PRDM1-202ENST00000369091 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
PRDM1-202ENST00000369091 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
PRDM1-202ENST00000369091 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
PRDM1-202ENST00000369091 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
PRDM1-202ENST00000369091 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
PRDM1-202ENST00000369091 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
PRDM1-202ENST00000369091 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
PRDM1-202ENST00000369091 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
PRDM1-202ENST00000369091 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
PRDM1-202ENST00000369091 KRTAP21-1Q3LI58 79 aa3.47□□□□□ -1.85
PRDM1-202ENST00000369091 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
PRDM1-202ENST00000369091 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
PRDM1-202ENST00000369091 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
PRDM1-202ENST00000369091 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
PRDM1-202ENST00000369091 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
PRDM1-202ENST00000369091 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
PRDM1-202ENST00000369091 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
PRDM1-202ENST00000369091 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
PRDM1-202ENST00000369091 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
PRDM1-202ENST00000369091 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
PRDM1-202ENST00000369091 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
PRDM1-202ENST00000369091 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
PRDM1-202ENST00000369091 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 7 ms