RNA–Protein interactions for RNA: ENST00000368930.5

CDC40-202, Transcript of cell division cycle 40, humanhuman

TSL 2 BASIC

Gene CDC40, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-202ENST00000368930 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
CDC40-202ENST00000368930 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
CDC40-202ENST00000368930 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
CDC40-202ENST00000368930 KRTAP19-5Q3LI72 72 aa4.16□□□□□ -1.74
CDC40-202ENST00000368930 USH2AO75445 5202 aa4.1□□□□□ -1.75
CDC40-202ENST00000368930 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
CDC40-202ENST00000368930 KMT2DO14686 5537 aa4□□□□□ -1.77
CDC40-202ENST00000368930 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
CDC40-202ENST00000368930 FSIP2Q5CZC0 6907 aa3.97□□□□□ -1.77
CDC40-202ENST00000368930 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
CDC40-202ENST00000368930 SSPOA2VEC9 5147 aa3.9□□□□□ -1.78
CDC40-202ENST00000368930 KRTAP19-6Q3LI70 58 aa3.9□□□□□ -1.79
CDC40-202ENST00000368930 INE1O15225 51 aa3.89□□□□□ -1.79
CDC40-202ENST00000368930 MT1EP04732 61 aa3.89□□□□□ -1.79
CDC40-202ENST00000368930 MT1LQ93083 61 aa3.88□□□□□ -1.79
CDC40-202ENST00000368930 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
CDC40-202ENST00000368930 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
CDC40-202ENST00000368930 KRTAP2-3P0C7H8 128 aa3.77□□□□□ -1.81
CDC40-202ENST00000368930 KRTAP2-4Q9BYR9 128 aa3.77□□□□□ -1.81
CDC40-202ENST00000368930 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
CDC40-202ENST00000368930 FCGBPQ9Y6R7 5405 aaPredicted RBP3.75□□□□□ -1.81
CDC40-202ENST00000368930 MT3P25713 68 aa3.67□□□□□ -1.82
CDC40-202ENST00000368930 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
CDC40-202ENST00000368930 KRTAP4-3Q9BYR4 195 aa3.65□□□□□ -1.83
CDC40-202ENST00000368930 MT1GP13640 62 aa3.64□□□□□ -1.83
CDC40-202ENST00000368930 MT1MQ8N339 61 aa3.63□□□□□ -1.83
CDC40-202ENST00000368930 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
CDC40-202ENST00000368930 SYNE2Q8WXH0 6885 aaKnown RBP3.55□□□□□ -1.84
CDC40-202ENST00000368930 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
CDC40-202ENST00000368930 SPRR2FQ96RM1 72 aa3.52□□□□□ -1.85
CDC40-202ENST00000368930 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
CDC40-202ENST00000368930 KRTAP6-3Q3LI67 103 aa3.4□□□□□ -1.86
CDC40-202ENST00000368930 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
CDC40-202ENST00000368930 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
CDC40-202ENST00000368930 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
CDC40-202ENST00000368930 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
CDC40-202ENST00000368930 MDN1Q9NU22 5596 aa3.29□□□□□ -1.88
CDC40-202ENST00000368930 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
CDC40-202ENST00000368930 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
CDC40-202ENST00000368930 MT1AP04731 61 aa3.27□□□□□ -1.89
CDC40-202ENST00000368930 NEBP20929 6669 aa3.25□□□□□ -1.89
CDC40-202ENST00000368930 SPRR2EP22531 72 aa3.24□□□□□ -1.89
CDC40-202ENST00000368930 SPRR2BP35325 72 aa3.24□□□□□ -1.89
CDC40-202ENST00000368930 SPRR2AP35326 72 aa3.24□□□□□ -1.89
CDC40-202ENST00000368930 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
CDC40-202ENST00000368930 SPRR2DP22532 72 aa3.12□□□□□ -1.91
CDC40-202ENST00000368930 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
CDC40-202ENST00000368930 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
CDC40-202ENST00000368930 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
CDC40-202ENST00000368930 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
CDC40-202ENST00000368930 KRTAP20-1Q3LI63 56 aa3.01□□□□□ -1.93
CDC40-202ENST00000368930 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
CDC40-202ENST00000368930 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
CDC40-202ENST00000368930 PRM1P04553 51 aa2.89□□□□□ -1.95
CDC40-202ENST00000368930 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
CDC40-202ENST00000368930 MT4P47944 62 aa2.74□□□□□ -1.97
CDC40-202ENST00000368930 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
CDC40-202ENST00000368930 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
CDC40-202ENST00000368930 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
CDC40-202ENST00000368930 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
CDC40-202ENST00000368930 KRTAP20-2Q3LI61 65 aa2.69□□□□□ -1.98
CDC40-202ENST00000368930 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
CDC40-202ENST00000368930 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
CDC40-202ENST00000368930 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
CDC40-202ENST00000368930 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
CDC40-202ENST00000368930 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
CDC40-202ENST00000368930 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
CDC40-202ENST00000368930 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
CDC40-202ENST00000368930 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
CDC40-202ENST00000368930 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
CDC40-202ENST00000368930 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
CDC40-202ENST00000368930 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
CDC40-202ENST00000368930 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
CDC40-202ENST00000368930 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
CDC40-202ENST00000368930 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
CDC40-202ENST00000368930 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
CDC40-202ENST00000368930 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 160.7 ms