RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 LCE3CQ5T5A8 94 aa5.44□□□□□ -1.54
SEMA6C-202ENST00000368912 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
SEMA6C-202ENST00000368912 KRTAP2-3P0C7H8 128 aa5.29□□□□□ -1.56
SEMA6C-202ENST00000368912 KRTAP2-4Q9BYR9 128 aa5.29□□□□□ -1.56
SEMA6C-202ENST00000368912 KRTAP2-1Q9BYU5 128 aa5.29□□□□□ -1.56
SEMA6C-202ENST00000368912 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
SEMA6C-202ENST00000368912 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
SEMA6C-202ENST00000368912 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
SEMA6C-202ENST00000368912 MDN1Q9NU22 5596 aa5.24□□□□□ -1.57
SEMA6C-202ENST00000368912 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
SEMA6C-202ENST00000368912 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
SEMA6C-202ENST00000368912 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
SEMA6C-202ENST00000368912 SYNE1Q8NF91 8797 aaKnown RBP5.22□□□□□ -1.57
SEMA6C-202ENST00000368912 MT1EP04732 61 aa5.21□□□□□ -1.58
SEMA6C-202ENST00000368912 MT1LQ93083 61 aa5.14□□□□□ -1.59
SEMA6C-202ENST00000368912 SPRR2EP22531 72 aa5.12□□□□□ -1.59
SEMA6C-202ENST00000368912 SPRR2BP35325 72 aa5.12□□□□□ -1.59
SEMA6C-202ENST00000368912 SPRR2AP35326 72 aa5.12□□□□□ -1.59
SEMA6C-202ENST00000368912 MT1GP13640 62 aa5.08□□□□□ -1.6
SEMA6C-202ENST00000368912 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
SEMA6C-202ENST00000368912 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
SEMA6C-202ENST00000368912 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.6
SEMA6C-202ENST00000368912 MT1MQ8N339 61 aa4.95□□□□□ -1.62
SEMA6C-202ENST00000368912 SPRR2DP22532 72 aa4.89□□□□□ -1.63
SEMA6C-202ENST00000368912 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
SEMA6C-202ENST00000368912 LCE1AQ5T7P2 110 aa4.86□□□□□ -1.63
SEMA6C-202ENST00000368912 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
SEMA6C-202ENST00000368912 PRM1P04553 51 aa4.78□□□□□ -1.64
SEMA6C-202ENST00000368912 KRTAP6-3Q3LI67 103 aa4.77□□□□□ -1.65
SEMA6C-202ENST00000368912 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
SEMA6C-202ENST00000368912 KRTAP5-9P26371 169 aa4.69□□□□□ -1.66
SEMA6C-202ENST00000368912 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
SEMA6C-202ENST00000368912 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
SEMA6C-202ENST00000368912 KRTAP4-9Q9BYQ8 210 aa4.65□□□□□ -1.67
SEMA6C-202ENST00000368912 MT4P47944 62 aa4.52□□□□□ -1.69
SEMA6C-202ENST00000368912 NEBP20929 6669 aa4.51□□□□□ -1.69
SEMA6C-202ENST00000368912 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
SEMA6C-202ENST00000368912 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
SEMA6C-202ENST00000368912 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
SEMA6C-202ENST00000368912 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
SEMA6C-202ENST00000368912 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
SEMA6C-202ENST00000368912 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
SEMA6C-202ENST00000368912 KRTAP20-1Q3LI63 56 aa4.3□□□□□ -1.72
SEMA6C-202ENST00000368912 MT1AP04731 61 aa4.28□□□□□ -1.72
SEMA6C-202ENST00000368912 KRTAP6-2Q3LI66 62 aa4.25□□□□□ -1.73
SEMA6C-202ENST00000368912 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
SEMA6C-202ENST00000368912 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
SEMA6C-202ENST00000368912 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
SEMA6C-202ENST00000368912 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
SEMA6C-202ENST00000368912 MUC19Q7Z5P9 8384 aa4.02□□□□□ -1.77
SEMA6C-202ENST00000368912 MT3P25713 68 aa4.01□□□□□ -1.77
SEMA6C-202ENST00000368912 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
SEMA6C-202ENST00000368912 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.78
SEMA6C-202ENST00000368912 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
SEMA6C-202ENST00000368912 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
SEMA6C-202ENST00000368912 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
SEMA6C-202ENST00000368912 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
SEMA6C-202ENST00000368912 KRTAP5-3Q6L8H2 238 aa3.54□□□□□ -1.84
SEMA6C-202ENST00000368912 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
SEMA6C-202ENST00000368912 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
SEMA6C-202ENST00000368912 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
SEMA6C-202ENST00000368912 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
SEMA6C-202ENST00000368912 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
SEMA6C-202ENST00000368912 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
SEMA6C-202ENST00000368912 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
SEMA6C-202ENST00000368912 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
SEMA6C-202ENST00000368912 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
SEMA6C-202ENST00000368912 KRTAP9-9Q9BYP9 154 aa3.07□□□□□ -1.92
SEMA6C-202ENST00000368912 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
SEMA6C-202ENST00000368912 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
SEMA6C-202ENST00000368912 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
SEMA6C-202ENST00000368912 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
SEMA6C-202ENST00000368912 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
SEMA6C-202ENST00000368912 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
SEMA6C-202ENST00000368912 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
SEMA6C-202ENST00000368912 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
SEMA6C-202ENST00000368912 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
SEMA6C-202ENST00000368912 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 153.5 ms