RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 KRTAP19-5Q3LI72 72 aa9.6□□□□□ -0.87
EFNA1-202ENST00000368407 KRTAP5-9P26371 169 aa9.58□□□□□ -0.88
EFNA1-202ENST00000368407 SPRR2FQ96RM1 72 aa9.56□□□□□ -0.88
EFNA1-202ENST00000368407 KRTAP19-7Q3SYF9 63 aa9.55□□□□□ -0.88
EFNA1-202ENST00000368407 MUC12Q9UKN1 5478 aa9.52□□□□□ -0.88
EFNA1-202ENST00000368407 KRTAP19-4Q3LI73 84 aa9.48□□□□□ -0.89
EFNA1-202ENST00000368407 MDN1Q9NU22 5596 aa9.41□□□□□ -0.9
EFNA1-202ENST00000368407 MT1EP04732 61 aa9.4□□□□□ -0.9
EFNA1-202ENST00000368407 KRTAP2-3P0C7H8 128 aa9.21□□□□□ -0.93
EFNA1-202ENST00000368407 KRTAP2-4Q9BYR9 128 aa9.21□□□□□ -0.93
EFNA1-202ENST00000368407 KRTAP2-1Q9BYU5 128 aa9.21□□□□□ -0.93
EFNA1-202ENST00000368407 LCE1AQ5T7P2 110 aa9.2□□□□□ -0.94
EFNA1-202ENST00000368407 KRTAP9-6A8MVA2 160 aa9.19□□□□□ -0.94
EFNA1-202ENST00000368407 SPRR2EP22531 72 aa9.19□□□□□ -0.94
EFNA1-202ENST00000368407 SPRR2BP35325 72 aa9.19□□□□□ -0.94
EFNA1-202ENST00000368407 SPRR2AP35326 72 aa9.19□□□□□ -0.94
EFNA1-202ENST00000368407 NEBP20929 6669 aa9.17□□□□□ -0.94
EFNA1-202ENST00000368407 MT1LQ93083 61 aa9.14□□□□□ -0.95
EFNA1-202ENST00000368407 KRTAP19-3Q7Z4W3 81 aa9.11□□□□□ -0.95
EFNA1-202ENST00000368407 LCE5AQ5TCM9 118 aa9.02□□□□□ -0.97
EFNA1-202ENST00000368407 MT1GP13640 62 aa8.97□□□□□ -0.97
EFNA1-202ENST00000368407 MT1MQ8N339 61 aa8.88□□□□□ -0.99
EFNA1-202ENST00000368407 SPRR2DP22532 72 aa8.86□□□□□ -0.99
EFNA1-202ENST00000368407 KRTAP4-7Q9BYR0 210 aa8.84□□□□□ -0.99
EFNA1-202ENST00000368407 DSTQ03001 7570 aaKnown RBP8.74□□□□□ -1.01
EFNA1-202ENST00000368407 KRTAP4-3Q9BYR4 195 aa8.74□□□□□ -1.01
EFNA1-202ENST00000368407 LCE3BQ5TA77 95 aa8.54□□□□□ -1.04
EFNA1-202ENST00000368407 KRTAP20-1Q3LI63 56 aa8.49□□□□□ -1.05
EFNA1-202ENST00000368407 LOC100996750A0A140TA64 210 aa8.33□□□□□ -1.08
EFNA1-202ENST00000368407 KRTAP2-2Q9BYT5 123 aa8.29□□□□□ -1.08
EFNA1-202ENST00000368407 KRTAP5-5Q701N2 237 aaPredicted RBP8.06□□□□□ -1.12
EFNA1-202ENST00000368407 KRTAP12-4P60329 112 aa8.03□□□□□ -1.12
EFNA1-202ENST00000368407 KRTAP5-4Q6L8H1 288 aa7.9□□□□□ -1.15
EFNA1-202ENST00000368407 MT1AP04731 61 aa7.85□□□□□ -1.15
EFNA1-202ENST00000368407 LCE4AQ5TA78 99 aa7.82□□□□□ -1.16
EFNA1-202ENST00000368407 KRTAP4-9Q9BYQ8 210 aa7.78□□□□□ -1.16
EFNA1-202ENST00000368407 SYNE1Q8NF91 8797 aaKnown RBP7.77□□□□□ -1.17
EFNA1-202ENST00000368407 MT4P47944 62 aa7.73□□□□□ -1.17
EFNA1-202ENST00000368407 KRTAP6-1Q3LI64 71 aa7.72□□□□□ -1.17
EFNA1-202ENST00000368407 LCE1DQ5T752 114 aa7.67□□□□□ -1.18
EFNA1-202ENST00000368407 KRTAP4-6Q9BYQ5 205 aa7.63□□□□□ -1.19
EFNA1-202ENST00000368407 HMCN1Q96RW7 5635 aa7.62□□□□□ -1.19
EFNA1-202ENST00000368407 LCE3DQ9BYE3 92 aa7.46□□□□□ -1.21
EFNA1-202ENST00000368407 LCE3EQ5T5B0 92 aa7.44□□□□□ -1.22
EFNA1-202ENST00000368407 KRTAP20-2Q3LI61 65 aa7.42□□□□□ -1.22
EFNA1-202ENST00000368407 KRTAP9-4Q9BYQ2 154 aa7.4□□□□□ -1.22
EFNA1-202ENST00000368407 KRTAP6-2Q3LI66 62 aa7.19□□□□□ -1.26
EFNA1-202ENST00000368407 KRTAP5-3Q6L8H2 238 aa7.17□□□□□ -1.26
EFNA1-202ENST00000368407 PRM1P04553 51 aa7.13□□□□□ -1.27
EFNA1-202ENST00000368407 KRTAP5-2Q701N4 177 aa7.08□□□□□ -1.28
EFNA1-202ENST00000368407 MT3P25713 68 aa7.03□□□□□ -1.28
EFNA1-202ENST00000368407 AHNAK2Q8IVF2 5795 aa6.94□□□□□ -1.3
EFNA1-202ENST00000368407 OBSCNQ5VST9 7968 aa6.8□□□□□ -1.32
EFNA1-202ENST00000368407 GPR98Q8WXG9 6306 aa6.76□□□□□ -1.33
EFNA1-202ENST00000368407 KRTAP5-10Q6L8G5 202 aa6.63□□□□□ -1.35
EFNA1-202ENST00000368407 KRTAP4-11Q9BYQ6 195 aa6.54□□□□□ -1.36
EFNA1-202ENST00000368407 KRTAP5-8O75690 187 aa6.31□□□□□ -1.4
EFNA1-202ENST00000368407 KRTAP5-1Q6L8H4 278 aa6.21□□□□□ -1.41
EFNA1-202ENST00000368407 LCE1EQ5T753 118 aa6.21□□□□□ -1.42
EFNA1-202ENST00000368407 KRTAP5-7Q6L8G8 165 aa6.19□□□□□ -1.42
EFNA1-202ENST00000368407 MUC5ACP98088 5654 aa6.07□□□□□ -1.44
EFNA1-202ENST00000368407 LCE1BQ5T7P3 118 aa5.87□□□□□ -1.47
EFNA1-202ENST00000368407 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
EFNA1-202ENST00000368407 LCE1CQ5T751 118 aa5.79□□□□□ -1.48
EFNA1-202ENST00000368407 KRTAP9-9Q9BYP9 154 aa5.77□□□□□ -1.49
EFNA1-202ENST00000368407 MUC5BQ9HC84 5762 aaPredicted RBP5.64□□□□□ -1.51
EFNA1-202ENST00000368407 AHNAKQ09666 5890 aaKnown RBP5.41□□□□□ -1.54
EFNA1-202ENST00000368407 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.36□□□□□ -1.55
EFNA1-202ENST00000368407 KRTAP5-11Q6L8G4 156 aa5.15□□□□□ -1.58
EFNA1-202ENST00000368407 KRTAP21-2Q3LI59 83 aa5.06□□□□□ -1.6
EFNA1-202ENST00000368407 KRTAP4-12Q9BQ66 201 aa5.03□□□□□ -1.6
EFNA1-202ENST00000368407 LCE1FQ5T754 118 aa4.74□□□□□ -1.65
EFNA1-202ENST00000368407 KRTAP21-1Q3LI58 79 aa4.68□□□□□ -1.66
EFNA1-202ENST00000368407 KRTAP4-4Q9BYR3 166 aa4.57□□□□□ -1.68
EFNA1-202ENST00000368407 PHGR1C9JFL3 82 aa4.44□□□□□ -1.7
EFNA1-202ENST00000368407 MUC19Q7Z5P9 8384 aa4.11□□□□□ -1.75
EFNA1-202ENST00000368407 MUC16Q8WXI7 14507 aa2.82□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 8.4 ms