RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 KRTAP6-3Q3LI67 103 aa5.8□□□□□ -1.48
LMNA-203ENST00000368297 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
LMNA-203ENST00000368297 MT1LQ93083 61 aa5.66□□□□□ -1.5
LMNA-203ENST00000368297 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
LMNA-203ENST00000368297 MUC12Q9UKN1 5478 aa5.62□□□□□ -1.51
LMNA-203ENST00000368297 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
LMNA-203ENST00000368297 SPRR2EP22531 72 aa5.61□□□□□ -1.51
LMNA-203ENST00000368297 SPRR2BP35325 72 aa5.61□□□□□ -1.51
LMNA-203ENST00000368297 SPRR2AP35326 72 aa5.61□□□□□ -1.51
LMNA-203ENST00000368297 NEBP20929 6669 aa5.61□□□□□ -1.51
LMNA-203ENST00000368297 LCE1AQ5T7P2 110 aa5.59□□□□□ -1.52
LMNA-203ENST00000368297 MT1GP13640 62 aa5.56□□□□□ -1.52
LMNA-203ENST00000368297 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
LMNA-203ENST00000368297 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
LMNA-203ENST00000368297 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
LMNA-203ENST00000368297 MT1MQ8N339 61 aa5.49□□□□□ -1.53
LMNA-203ENST00000368297 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
LMNA-203ENST00000368297 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
LMNA-203ENST00000368297 SPRR2DP22532 72 aa5.41□□□□□ -1.54
LMNA-203ENST00000368297 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
LMNA-203ENST00000368297 KRTAP20-1Q3LI63 56 aa5.23□□□□□ -1.57
LMNA-203ENST00000368297 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
LMNA-203ENST00000368297 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
LMNA-203ENST00000368297 DSTQ03001 7570 aaKnown RBP5.15□□□□□ -1.58
LMNA-203ENST00000368297 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
LMNA-203ENST00000368297 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
LMNA-203ENST00000368297 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
LMNA-203ENST00000368297 INE1O15225 51 aa5.08□□□□□ -1.6
LMNA-203ENST00000368297 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
LMNA-203ENST00000368297 KRTAP2-1Q9BYU5 128 aa5□□□□□ -1.61
LMNA-203ENST00000368297 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
LMNA-203ENST00000368297 MT1AP04731 61 aa4.83□□□□□ -1.64
LMNA-203ENST00000368297 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
LMNA-203ENST00000368297 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
LMNA-203ENST00000368297 KRTAP6-1Q3LI64 71 aa4.77□□□□□ -1.65
LMNA-203ENST00000368297 MT4P47944 62 aa4.7□□□□□ -1.66
LMNA-203ENST00000368297 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
LMNA-203ENST00000368297 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
LMNA-203ENST00000368297 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.66
LMNA-203ENST00000368297 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
LMNA-203ENST00000368297 KRTAP4-6Q9BYQ5 205 aa4.61□□□□□ -1.67
LMNA-203ENST00000368297 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
LMNA-203ENST00000368297 GPR98Q8WXG9 6306 aa4.56□□□□□ -1.68
LMNA-203ENST00000368297 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
LMNA-203ENST00000368297 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
LMNA-203ENST00000368297 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
LMNA-203ENST00000368297 MT3P25713 68 aa4.39□□□□□ -1.71
LMNA-203ENST00000368297 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
LMNA-203ENST00000368297 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
LMNA-203ENST00000368297 AHNAK2Q8IVF2 5795 aa4.3□□□□□ -1.72
LMNA-203ENST00000368297 LCE3DQ9BYE3 92 aa4.22□□□□□ -1.73
LMNA-203ENST00000368297 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
LMNA-203ENST00000368297 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
LMNA-203ENST00000368297 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
LMNA-203ENST00000368297 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
LMNA-203ENST00000368297 KRTAP5-7Q6L8G8 165 aa3.92□□□□□ -1.78
LMNA-203ENST00000368297 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
LMNA-203ENST00000368297 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
LMNA-203ENST00000368297 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
LMNA-203ENST00000368297 PRM1P04553 51 aa3.67□□□□□ -1.82
LMNA-203ENST00000368297 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
LMNA-203ENST00000368297 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
LMNA-203ENST00000368297 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
LMNA-203ENST00000368297 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
LMNA-203ENST00000368297 AHNAKQ09666 5890 aaKnown RBP3.56□□□□□ -1.84
LMNA-203ENST00000368297 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
LMNA-203ENST00000368297 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
LMNA-203ENST00000368297 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
LMNA-203ENST00000368297 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
LMNA-203ENST00000368297 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
LMNA-203ENST00000368297 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
LMNA-203ENST00000368297 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
LMNA-203ENST00000368297 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
LMNA-203ENST00000368297 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
LMNA-203ENST00000368297 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
LMNA-203ENST00000368297 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
LMNA-203ENST00000368297 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 72.7 ms