RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SMIM26A0A096LP01 95 aa3.83□□□□□ -1.8
CD48-202ENST00000368046 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
CD48-202ENST00000368046 KRTAP12-1P59990 96 aa3.82□□□□□ -1.8
CD48-202ENST00000368046 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
CD48-202ENST00000368046 TMEM258P61165 79 aa3.79□□□□□ -1.8
CD48-202ENST00000368046 PRR15LQ9BU68 103 aa3.79□□□□□ -1.8
CD48-202ENST00000368046 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
CD48-202ENST00000368046 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
CD48-202ENST00000368046 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
CD48-202ENST00000368046 A8MU10 97 aa3.76□□□□□ -1.81
CD48-202ENST00000368046 SPRR2DP22532 72 aa3.74□□□□□ -1.81
CD48-202ENST00000368046 MT3P25713 68 aa3.74□□□□□ -1.81
CD48-202ENST00000368046 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
CD48-202ENST00000368046 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
CD48-202ENST00000368046 UQCR11O14957 56 aa3.68□□□□□ -1.82
CD48-202ENST00000368046 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
CD48-202ENST00000368046 MT1EP04732 61 aa3.65□□□□□ -1.83
CD48-202ENST00000368046 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.83
CD48-202ENST00000368046 TNP1P09430 55 aa3.64□□□□□ -1.83
CD48-202ENST00000368046 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
CD48-202ENST00000368046 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
CD48-202ENST00000368046 V9GYY9 64 aa3.61□□□□□ -1.83
CD48-202ENST00000368046 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
CD48-202ENST00000368046 MIR22HGQ0VDD5 57 aa3.59□□□□□ -1.83
CD48-202ENST00000368046 Q1T7F1 81 aa3.58□□□□□ -1.84
CD48-202ENST00000368046 MT1GP13640 62 aa3.57□□□□□ -1.84
CD48-202ENST00000368046 LCE3AQ5TA76 89 aa3.57□□□□□ -1.84
CD48-202ENST00000368046 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
CD48-202ENST00000368046 PSPHP1O15172 72 aa3.55□□□□□ -1.84
CD48-202ENST00000368046 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
CD48-202ENST00000368046 K7ERS5 55 aa3.52□□□□□ -1.85
CD48-202ENST00000368046 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
CD48-202ENST00000368046 MT1LQ93083 61 aa3.51□□□□□ -1.85
CD48-202ENST00000368046 RPS28P62857 69 aaKnown RBP3.48□□□□□ -1.85
CD48-202ENST00000368046 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
CD48-202ENST00000368046 MT1MQ8N339 61 aa3.47□□□□□ -1.85
CD48-202ENST00000368046 KRTAP12-3P60328 96 aa3.45□□□□□ -1.86
CD48-202ENST00000368046 A6NED7 52 aa3.43□□□□□ -1.86
CD48-202ENST00000368046 CDC42SE1Q9NRR8 79 aa3.33□□□□□ -1.88
CD48-202ENST00000368046 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
CD48-202ENST00000368046 ROMO1P60602 79 aa3.29□□□□□ -1.88
CD48-202ENST00000368046 MT4P47944 62 aa3.26□□□□□ -1.89
CD48-202ENST00000368046 PRAC1Q96KF2 57 aa3.25□□□□□ -1.89
CD48-202ENST00000368046 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
CD48-202ENST00000368046 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
CD48-202ENST00000368046 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
CD48-202ENST00000368046 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
CD48-202ENST00000368046 SPRR5A0A1B0GTR4 108 aa3.1□□□□□ -1.91
CD48-202ENST00000368046 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
CD48-202ENST00000368046 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
CD48-202ENST00000368046 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
CD48-202ENST00000368046 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
CD48-202ENST00000368046 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
CD48-202ENST00000368046 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
CD48-202ENST00000368046 BRK1Q8WUW1 75 aa3.01□□□□□ -1.93
CD48-202ENST00000368046 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
CD48-202ENST00000368046 MT1AP04731 61 aa2.98□□□□□ -1.93
CD48-202ENST00000368046 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
CD48-202ENST00000368046 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
CD48-202ENST00000368046 PMAIP1Q13794 54 aa2.86□□□□□ -1.95
CD48-202ENST00000368046 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
CD48-202ENST00000368046 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
CD48-202ENST00000368046 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
CD48-202ENST00000368046 PRO0628Q9UI54 55 aa2.69□□□□□ -1.98
CD48-202ENST00000368046 KTN1-AS1Q86SY8 53 aa2.54□□□□□ -2
CD48-202ENST00000368046 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
CD48-202ENST00000368046 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
CD48-202ENST00000368046 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
CD48-202ENST00000368046 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
CD48-202ENST00000368046 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
CD48-202ENST00000368046 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
CD48-202ENST00000368046 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
CD48-202ENST00000368046 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
CD48-202ENST00000368046 PRM1P04553 51 aa1.67□□□□□ -2.14
CD48-202ENST00000368046 INE1O15225 51 aa1.55□□□□□ -2.16
CD48-202ENST00000368046 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
CD48-202ENST00000368046 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 37.9 ms