RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 PSPHP1O15172 72 aa3.9□□□□□ -1.79
NUP43-202ENST00000367402 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
NUP43-202ENST00000367402 KMT2DO14686 5537 aa3.89□□□□□ -1.79
NUP43-202ENST00000367402 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
NUP43-202ENST00000367402 RPS28P62857 69 aaKnown RBP3.87□□□□□ -1.79
NUP43-202ENST00000367402 MIR22HGQ0VDD5 57 aa3.87□□□□□ -1.79
NUP43-202ENST00000367402 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
NUP43-202ENST00000367402 NEBP20929 6669 aa3.81□□□□□ -1.8
NUP43-202ENST00000367402 A6NED7 52 aa3.79□□□□□ -1.8
NUP43-202ENST00000367402 C10orf95Q9H7T3 257 aa3.79□□□□□ -1.8
NUP43-202ENST00000367402 K7ERS5 55 aa3.78□□□□□ -1.8
NUP43-202ENST00000367402 SPRR2EP22531 72 aa3.77□□□□□ -1.81
NUP43-202ENST00000367402 SPRR2BP35325 72 aa3.77□□□□□ -1.81
NUP43-202ENST00000367402 SPRR2AP35326 72 aa3.77□□□□□ -1.81
NUP43-202ENST00000367402 TNP1P09430 55 aa3.76□□□□□ -1.81
NUP43-202ENST00000367402 MDN1Q9NU22 5596 aa3.74□□□□□ -1.81
NUP43-202ENST00000367402 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
NUP43-202ENST00000367402 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
NUP43-202ENST00000367402 KRTAP19-7Q3SYF9 63 aa3.68□□□□□ -1.82
NUP43-202ENST00000367402 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
NUP43-202ENST00000367402 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
NUP43-202ENST00000367402 MT1EP04732 61 aa3.65□□□□□ -1.83
NUP43-202ENST00000367402 SPRR2DP22532 72 aa3.65□□□□□ -1.83
NUP43-202ENST00000367402 KRTAP25-1Q3LHN0 102 aa3.63□□□□□ -1.83
NUP43-202ENST00000367402 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
NUP43-202ENST00000367402 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
NUP43-202ENST00000367402 CDC42SE1Q9NRR8 79 aa3.62□□□□□ -1.83
NUP43-202ENST00000367402 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
NUP43-202ENST00000367402 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
NUP43-202ENST00000367402 ROMO1P60602 79 aa3.54□□□□□ -1.84
NUP43-202ENST00000367402 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
NUP43-202ENST00000367402 MT1GP13640 62 aa3.53□□□□□ -1.84
NUP43-202ENST00000367402 KRTAP12-3P60328 96 aa3.53□□□□□ -1.84
NUP43-202ENST00000367402 MT1LQ93083 61 aa3.53□□□□□ -1.84
NUP43-202ENST00000367402 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
NUP43-202ENST00000367402 PRO0628Q9UI54 55 aa3.52□□□□□ -1.85
NUP43-202ENST00000367402 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
NUP43-202ENST00000367402 MT1MQ8N339 61 aa3.46□□□□□ -1.86
NUP43-202ENST00000367402 BRK1Q8WUW1 75 aa3.45□□□□□ -1.86
NUP43-202ENST00000367402 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
NUP43-202ENST00000367402 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
NUP43-202ENST00000367402 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
NUP43-202ENST00000367402 PMAIP1Q13794 54 aa3.36□□□□□ -1.87
NUP43-202ENST00000367402 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
NUP43-202ENST00000367402 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
NUP43-202ENST00000367402 MT4P47944 62 aa3.19□□□□□ -1.9
NUP43-202ENST00000367402 KTN1-AS1Q86SY8 53 aa3.18□□□□□ -1.9
NUP43-202ENST00000367402 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
NUP43-202ENST00000367402 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
NUP43-202ENST00000367402 PRAC1Q96KF2 57 aa3.08□□□□□ -1.92
NUP43-202ENST00000367402 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
NUP43-202ENST00000367402 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
NUP43-202ENST00000367402 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
NUP43-202ENST00000367402 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
NUP43-202ENST00000367402 MT1AP04731 61 aa2.99□□□□□ -1.93
NUP43-202ENST00000367402 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
NUP43-202ENST00000367402 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
NUP43-202ENST00000367402 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
NUP43-202ENST00000367402 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
NUP43-202ENST00000367402 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
NUP43-202ENST00000367402 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
NUP43-202ENST00000367402 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
NUP43-202ENST00000367402 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
NUP43-202ENST00000367402 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
NUP43-202ENST00000367402 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
NUP43-202ENST00000367402 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
NUP43-202ENST00000367402 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
NUP43-202ENST00000367402 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
NUP43-202ENST00000367402 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
NUP43-202ENST00000367402 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
NUP43-202ENST00000367402 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
NUP43-202ENST00000367402 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
NUP43-202ENST00000367402 INE1O15225 51 aa2.29□□□□□ -2.04
NUP43-202ENST00000367402 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
NUP43-202ENST00000367402 PRM1P04553 51 aa1.82□□□□□ -2.12
NUP43-202ENST00000367402 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
NUP43-202ENST00000367402 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
NUP43-202ENST00000367402 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 13.6 ms