RNA–Protein interactions for RNA: ENST00000366955.7

CENPF-201, Transcript of centromere protein F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CENPF, Length 10,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPF-201ENST00000366955 KRTAP6-3Q3LI67 103 aa1.45□□□□□ -2.18
CENPF-201ENST00000366955 KRTAP9-8Q9BYQ0 159 aa1.45□□□□□ -2.18
CENPF-201ENST00000366955 LCE2AQ5TA79 106 aaPredicted RBP1.44□□□□□ -2.18
CENPF-201ENST00000366955 LCE5AQ5TCM9 118 aa1.44□□□□□ -2.18
CENPF-201ENST00000366955 LCE1BQ5T7P3 118 aa1.43□□□□□ -2.18
CENPF-201ENST00000366955 KRTAP19-6Q3LI70 58 aa1.43□□□□□ -2.18
CENPF-201ENST00000366955 KRTAP2-2Q9BYT5 123 aa1.43□□□□□ -2.18
CENPF-201ENST00000366955 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
CENPF-201ENST00000366955 LCE3DQ9BYE3 92 aa1.42□□□□□ -2.18
CENPF-201ENST00000366955 LCE1DQ5T752 114 aa1.4□□□□□ -2.18
CENPF-201ENST00000366955 KRTAP19-8Q3LI54 63 aa1.4□□□□□ -2.19
CENPF-201ENST00000366955 LCE3EQ5T5B0 92 aa1.4□□□□□ -2.19
CENPF-201ENST00000366955 KRTAP9-3Q9BYQ3 159 aa1.39□□□□□ -2.19
CENPF-201ENST00000366955 KRTAP19-3Q7Z4W3 81 aa1.39□□□□□ -2.19
CENPF-201ENST00000366955 KMT2DO14686 5537 aa1.37□□□□□ -2.19
CENPF-201ENST00000366955 LCE1CQ5T751 118 aa1.37□□□□□ -2.19
CENPF-201ENST00000366955 LCE1EQ5T753 118 aa1.37□□□□□ -2.19
CENPF-201ENST00000366955 LCE1FQ5T754 118 aa1.37□□□□□ -2.19
CENPF-201ENST00000366955 LCE1AQ5T7P2 110 aa1.37□□□□□ -2.19
CENPF-201ENST00000366955 MT1BP07438 61 aa1.37□□□□□ -2.19
CENPF-201ENST00000366955 LCE4AQ5TA78 99 aa1.37□□□□□ -2.19
CENPF-201ENST00000366955 KRTAP4-8A0A0G2JLE6 195 aa1.35□□□□□ -2.19
CENPF-201ENST00000366955 KRTAP4-8Q9BYQ9 185 aa1.35□□□□□ -2.19
CENPF-201ENST00000366955 GPR98Q8WXG9 6306 aa1.34□□□□□ -2.2
CENPF-201ENST00000366955 SYNE2Q8WXH0 6885 aaKnown RBP1.33□□□□□ -2.2
CENPF-201ENST00000366955 KRTAP9-9Q9BYP9 154 aa1.33□□□□□ -2.2
CENPF-201ENST00000366955 MT1XP80297 61 aa1.32□□□□□ -2.2
CENPF-201ENST00000366955 KRTAP4-9Q9BYQ8 210 aa1.32□□□□□ -2.2
CENPF-201ENST00000366955 FSIP2Q5CZC0 6907 aa1.32□□□□□ -2.2
CENPF-201ENST00000366955 MT1LQ93083 61 aa1.31□□□□□ -2.2
CENPF-201ENST00000366955 MDN1Q9NU22 5596 aa1.3□□□□□ -2.2
CENPF-201ENST00000366955 NEBP20929 6669 aa1.29□□□□□ -2.2
CENPF-201ENST00000366955 KRTAP4-7Q9BYR0 210 aa1.27□□□□□ -2.21
CENPF-201ENST00000366955 MT1MQ8N339 61 aa1.25□□□□□ -2.21
CENPF-201ENST00000366955 MT1EP04732 61 aa1.24□□□□□ -2.21
CENPF-201ENST00000366955 LOC100996750A0A140TA64 210 aa1.23□□□□□ -2.21
CENPF-201ENST00000366955 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
CENPF-201ENST00000366955 PRM1P04553 51 aa1.21□□□□□ -2.22
CENPF-201ENST00000366955 FCGBPQ9Y6R7 5405 aaPredicted RBP1.19□□□□□ -2.22
CENPF-201ENST00000366955 KRTAP19-7Q3SYF9 63 aa1.18□□□□□ -2.22
CENPF-201ENST00000366955 OBSCNQ5VST9 7968 aa1.17□□□□□ -2.22
CENPF-201ENST00000366955 MACF1Q9UPN3 7388 aaKnown RBP1.17□□□□□ -2.22
CENPF-201ENST00000366955 MT1AP04731 61 aa1.16□□□□□ -2.22
CENPF-201ENST00000366955 KRTAP4-3Q9BYR4 195 aa1.15□□□□□ -2.22
CENPF-201ENST00000366955 MUC5BQ9HC84 5762 aaPredicted RBP1.14□□□□□ -2.23
CENPF-201ENST00000366955 MUC12Q9UKN1 5478 aa1.14□□□□□ -2.23
CENPF-201ENST00000366955 KRTAP9-6A8MVA2 160 aa1.12□□□□□ -2.23
CENPF-201ENST00000366955 KRTAP9-4Q9BYQ2 154 aa1.12□□□□□ -2.23
CENPF-201ENST00000366955 KRTAP6-2Q3LI66 62 aa1.12□□□□□ -2.23
CENPF-201ENST00000366955 SYNE1Q8NF91 8797 aaKnown RBP1.11□□□□□ -2.23
CENPF-201ENST00000366955 DSTQ03001 7570 aaKnown RBP1.1□□□□□ -2.23
CENPF-201ENST00000366955 KRTAP5-9P26371 169 aa1.07□□□□□ -2.24
CENPF-201ENST00000366955 KRTAP20-2Q3LI61 65 aa1.06□□□□□ -2.24
CENPF-201ENST00000366955 HMCN1Q96RW7 5635 aa1.06□□□□□ -2.24
CENPF-201ENST00000366955 KRTAP4-2Q9BYR5 136 aa1.05□□□□□ -2.24
CENPF-201ENST00000366955 KRTAP6-1Q3LI64 71 aa1.02□□□□□ -2.25
CENPF-201ENST00000366955 KRTAP5-5Q701N2 237 aaPredicted RBP1.01□□□□□ -2.25
CENPF-201ENST00000366955 KRTAP4-4Q9BYR3 166 aa1.01□□□□□ -2.25
CENPF-201ENST00000366955 KRTAP4-6Q9BYQ5 205 aa0.99□□□□□ -2.25
CENPF-201ENST00000366955 AHNAKQ09666 5890 aaKnown RBP0.98□□□□□ -2.25
CENPF-201ENST00000366955 KRTAP5-3Q6L8H2 238 aa0.97□□□□□ -2.25
CENPF-201ENST00000366955 KRTAP4-12Q9BQ66 201 aa0.95□□□□□ -2.26
CENPF-201ENST00000366955 KRTAP5-4Q6L8H1 288 aa0.93□□□□□ -2.26
CENPF-201ENST00000366955 KRTAP4-11Q9BYQ6 195 aa0.93□□□□□ -2.26
CENPF-201ENST00000366955 PHGR1C9JFL3 82 aa0.92□□□□□ -2.26
CENPF-201ENST00000366955 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
CENPF-201ENST00000366955 KRTAP5-7Q6L8G8 165 aa0.91□□□□□ -2.26
CENPF-201ENST00000366955 KRTAP5-2Q701N4 177 aa0.87□□□□□ -2.27
CENPF-201ENST00000366955 MUC19Q7Z5P9 8384 aa0.86□□□□□ -2.27
CENPF-201ENST00000366955 KRTAP5-10Q6L8G5 202 aa0.81□□□□□ -2.28
CENPF-201ENST00000366955 KRTAP5-8O75690 187 aa0.78□□□□□ -2.29
CENPF-201ENST00000366955 KRTAP5-1Q6L8H4 278 aa0.76□□□□□ -2.29
CENPF-201ENST00000366955 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
CENPF-201ENST00000366955 KRTAP21-2Q3LI59 83 aa0.64□□□□□ -2.31
CENPF-201ENST00000366955 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.63□□□□□ -2.31
CENPF-201ENST00000366955 KRTAP5-11Q6L8G4 156 aa0.57□□□□□ -2.32
CENPF-201ENST00000366955 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 57.9 ms