RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 KRTAP19-7Q3SYF9 63 aa5.19□□□□□ -1.58
PRKN-204ENST00000366896 SYNE2Q8WXH0 6885 aaKnown RBP5.16□□□□□ -1.58
PRKN-204ENST00000366896 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.58
PRKN-204ENST00000366896 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.58
PRKN-204ENST00000366896 KRTAP2-1Q9BYU5 128 aa5.15□□□□□ -1.58
PRKN-204ENST00000366896 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
PRKN-204ENST00000366896 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
PRKN-204ENST00000366896 KRTAP6-3Q3LI67 103 aa5.08□□□□□ -1.6
PRKN-204ENST00000366896 SPRR2FQ96RM1 72 aa5.05□□□□□ -1.6
PRKN-204ENST00000366896 MT1LQ93083 61 aa5.04□□□□□ -1.6
PRKN-204ENST00000366896 MT1EP04732 61 aa5.04□□□□□ -1.6
PRKN-204ENST00000366896 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
PRKN-204ENST00000366896 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.61
PRKN-204ENST00000366896 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
PRKN-204ENST00000366896 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
PRKN-204ENST00000366896 SPRR2EP22531 72 aa4.85□□□□□ -1.63
PRKN-204ENST00000366896 SPRR2BP35325 72 aa4.85□□□□□ -1.63
PRKN-204ENST00000366896 SPRR2AP35326 72 aa4.85□□□□□ -1.63
PRKN-204ENST00000366896 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
PRKN-204ENST00000366896 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
PRKN-204ENST00000366896 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
PRKN-204ENST00000366896 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
PRKN-204ENST00000366896 MT1GP13640 62 aa4.79□□□□□ -1.64
PRKN-204ENST00000366896 NEBP20929 6669 aa4.77□□□□□ -1.65
PRKN-204ENST00000366896 MT1MQ8N339 61 aa4.74□□□□□ -1.65
PRKN-204ENST00000366896 SPRR2DP22532 72 aa4.68□□□□□ -1.66
PRKN-204ENST00000366896 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
PRKN-204ENST00000366896 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
PRKN-204ENST00000366896 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
PRKN-204ENST00000366896 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
PRKN-204ENST00000366896 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
PRKN-204ENST00000366896 MT1AP04731 61 aa4.35□□□□□ -1.71
PRKN-204ENST00000366896 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
PRKN-204ENST00000366896 GPR98Q8WXG9 6306 aa4.33□□□□□ -1.72
PRKN-204ENST00000366896 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
PRKN-204ENST00000366896 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
PRKN-204ENST00000366896 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
PRKN-204ENST00000366896 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
PRKN-204ENST00000366896 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
PRKN-204ENST00000366896 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
PRKN-204ENST00000366896 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.74
PRKN-204ENST00000366896 PRM1P04553 51 aa4.11□□□□□ -1.75
PRKN-204ENST00000366896 MT4P47944 62 aa4.06□□□□□ -1.76
PRKN-204ENST00000366896 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
PRKN-204ENST00000366896 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
PRKN-204ENST00000366896 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
PRKN-204ENST00000366896 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
PRKN-204ENST00000366896 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
PRKN-204ENST00000366896 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
PRKN-204ENST00000366896 MT3P25713 68 aa3.83□□□□□ -1.8
PRKN-204ENST00000366896 KRTAP5-3Q6L8H2 238 aa3.8□□□□□ -1.8
PRKN-204ENST00000366896 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
PRKN-204ENST00000366896 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
PRKN-204ENST00000366896 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
PRKN-204ENST00000366896 KRTAP5-7Q6L8G8 165 aa3.62□□□□□ -1.83
PRKN-204ENST00000366896 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
PRKN-204ENST00000366896 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.83
PRKN-204ENST00000366896 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
PRKN-204ENST00000366896 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
PRKN-204ENST00000366896 KRTAP5-8O75690 187 aa3.34□□□□□ -1.88
PRKN-204ENST00000366896 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
PRKN-204ENST00000366896 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
PRKN-204ENST00000366896 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
PRKN-204ENST00000366896 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
PRKN-204ENST00000366896 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
PRKN-204ENST00000366896 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
PRKN-204ENST00000366896 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
PRKN-204ENST00000366896 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
PRKN-204ENST00000366896 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
PRKN-204ENST00000366896 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
PRKN-204ENST00000366896 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
PRKN-204ENST00000366896 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
PRKN-204ENST00000366896 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
PRKN-204ENST00000366896 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
PRKN-204ENST00000366896 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
PRKN-204ENST00000366896 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
PRKN-204ENST00000366896 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms