RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 MT1LQ93083 61 aa3.36□□□□□ -1.87
CNIH4-202ENST00000366857 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
CNIH4-202ENST00000366857 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
CNIH4-202ENST00000366857 MUC12Q9UKN1 5478 aa3.3□□□□□ -1.88
CNIH4-202ENST00000366857 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
CNIH4-202ENST00000366857 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
CNIH4-202ENST00000366857 NEBP20929 6669 aa3.25□□□□□ -1.89
CNIH4-202ENST00000366857 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
CNIH4-202ENST00000366857 MDN1Q9NU22 5596 aa3.24□□□□□ -1.89
CNIH4-202ENST00000366857 KRTAP4-7Q9BYR0 210 aa3.2□□□□□ -1.9
CNIH4-202ENST00000366857 KRTAP9-7A8MTY7 169 aa3.2□□□□□ -1.9
CNIH4-202ENST00000366857 KRTAP19-3Q7Z4W3 81 aa3.19□□□□□ -1.9
CNIH4-202ENST00000366857 MT1MQ8N339 61 aa3.18□□□□□ -1.9
CNIH4-202ENST00000366857 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
CNIH4-202ENST00000366857 LCE1AQ5T7P2 110 aa3.16□□□□□ -1.9
CNIH4-202ENST00000366857 MT1GP13640 62 aa3.13□□□□□ -1.91
CNIH4-202ENST00000366857 KRTAP2-3P0C7H8 128 aa3.12□□□□□ -1.91
CNIH4-202ENST00000366857 KRTAP2-4Q9BYR9 128 aa3.12□□□□□ -1.91
CNIH4-202ENST00000366857 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
CNIH4-202ENST00000366857 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
CNIH4-202ENST00000366857 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
CNIH4-202ENST00000366857 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
CNIH4-202ENST00000366857 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
CNIH4-202ENST00000366857 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
CNIH4-202ENST00000366857 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
CNIH4-202ENST00000366857 SPRR2EP22531 72 aa2.81□□□□□ -1.96
CNIH4-202ENST00000366857 SPRR2BP35325 72 aa2.81□□□□□ -1.96
CNIH4-202ENST00000366857 SPRR2AP35326 72 aa2.81□□□□□ -1.96
CNIH4-202ENST00000366857 DSTQ03001 7570 aaKnown RBP2.81□□□□□ -1.96
CNIH4-202ENST00000366857 MT1AP04731 61 aa2.81□□□□□ -1.96
CNIH4-202ENST00000366857 KRTAP2-2Q9BYT5 123 aa2.79□□□□□ -1.96
CNIH4-202ENST00000366857 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
CNIH4-202ENST00000366857 INE1O15225 51 aa2.75□□□□□ -1.97
CNIH4-202ENST00000366857 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
CNIH4-202ENST00000366857 LCE3BQ5TA77 95 aa2.73□□□□□ -1.97
CNIH4-202ENST00000366857 SPRR2DP22532 72 aa2.71□□□□□ -1.98
CNIH4-202ENST00000366857 KRTAP9-4Q9BYQ2 154 aa2.71□□□□□ -1.98
CNIH4-202ENST00000366857 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
CNIH4-202ENST00000366857 LCE4AQ5TA78 99 aa2.68□□□□□ -1.98
CNIH4-202ENST00000366857 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.98
CNIH4-202ENST00000366857 SYNE1Q8NF91 8797 aaKnown RBP2.59□□□□□ -2
CNIH4-202ENST00000366857 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
CNIH4-202ENST00000366857 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
CNIH4-202ENST00000366857 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
CNIH4-202ENST00000366857 KRTAP9-9Q9BYP9 154 aa2.54□□□□□ -2
CNIH4-202ENST00000366857 LCE1DQ5T752 114 aa2.54□□□□□ -2
CNIH4-202ENST00000366857 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2
CNIH4-202ENST00000366857 KRTAP4-9Q9BYQ8 210 aa2.51□□□□□ -2.01
CNIH4-202ENST00000366857 KRTAP6-2Q3LI66 62 aa2.5□□□□□ -2.01
CNIH4-202ENST00000366857 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
CNIH4-202ENST00000366857 MT3P25713 68 aa2.38□□□□□ -2.03
CNIH4-202ENST00000366857 KRTAP5-8O75690 187 aa2.34□□□□□ -2.04
CNIH4-202ENST00000366857 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
CNIH4-202ENST00000366857 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
CNIH4-202ENST00000366857 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
CNIH4-202ENST00000366857 MT4P47944 62 aa2.29□□□□□ -2.04
CNIH4-202ENST00000366857 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
CNIH4-202ENST00000366857 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
CNIH4-202ENST00000366857 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
CNIH4-202ENST00000366857 KRTAP4-11Q9BYQ6 195 aa2.26□□□□□ -2.05
CNIH4-202ENST00000366857 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
CNIH4-202ENST00000366857 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
CNIH4-202ENST00000366857 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
CNIH4-202ENST00000366857 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
CNIH4-202ENST00000366857 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
CNIH4-202ENST00000366857 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
CNIH4-202ENST00000366857 PRM1P04553 51 aa2□□□□□ -2.09
CNIH4-202ENST00000366857 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
CNIH4-202ENST00000366857 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
CNIH4-202ENST00000366857 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.1
CNIH4-202ENST00000366857 OBSCNQ5VST9 7968 aa1.89□□□□□ -2.11
CNIH4-202ENST00000366857 LCE1FQ5T754 118 aa1.8□□□□□ -2.12
CNIH4-202ENST00000366857 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
CNIH4-202ENST00000366857 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
CNIH4-202ENST00000366857 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
CNIH4-202ENST00000366857 KRTAP4-4Q9BYR3 166 aa1.43□□□□□ -2.18
CNIH4-202ENST00000366857 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 127.1 ms