RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 K7ERS5 55 aa7.1□□□□□ -1.27
H3F3A-204ENST00000366816 MT1LQ93083 61 aa7.1□□□□□ -1.27
H3F3A-204ENST00000366816 A6NED7 52 aa7.06□□□□□ -1.28
H3F3A-204ENST00000366816 RPS28P62857 69 aaKnown RBP7.05□□□□□ -1.28
H3F3A-204ENST00000366816 PP632Q6XCG6 107 aa7.03□□□□□ -1.28
H3F3A-204ENST00000366816 MT1MQ8N339 61 aa7.02□□□□□ -1.29
H3F3A-204ENST00000366816 KRTAP25-1Q3LHN0 102 aa6.99□□□□□ -1.29
H3F3A-204ENST00000366816 GPR98Q8WXG9 6306 aa6.99□□□□□ -1.29
H3F3A-204ENST00000366816 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
H3F3A-204ENST00000366816 KRTAP4-3Q9BYR4 195 aa6.93□□□□□ -1.3
H3F3A-204ENST00000366816 KRTAP4-9Q9BYQ8 210 aa6.85□□□□□ -1.31
H3F3A-204ENST00000366816 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
H3F3A-204ENST00000366816 CDC42SE1Q9NRR8 79 aa6.77□□□□□ -1.33
H3F3A-204ENST00000366816 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
H3F3A-204ENST00000366816 ROMO1P60602 79 aa6.7□□□□□ -1.34
H3F3A-204ENST00000366816 LCE1DQ5T752 114 aa6.65□□□□□ -1.34
H3F3A-204ENST00000366816 LCE4AQ5TA78 99 aa6.62□□□□□ -1.35
H3F3A-204ENST00000366816 MT4P47944 62 aa6.61□□□□□ -1.35
H3F3A-204ENST00000366816 KRTAP15-1Q3LI76 137 aa6.58□□□□□ -1.36
H3F3A-204ENST00000366816 KRTAP5-4Q6L8H1 288 aa6.55□□□□□ -1.36
H3F3A-204ENST00000366816 HMCN1Q96RW7 5635 aa6.48□□□□□ -1.37
H3F3A-204ENST00000366816 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
H3F3A-204ENST00000366816 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
H3F3A-204ENST00000366816 LCE3CQ5T5A8 94 aa6.45□□□□□ -1.38
H3F3A-204ENST00000366816 KRTAP4-6Q9BYQ5 205 aa6.45□□□□□ -1.38
H3F3A-204ENST00000366816 KRTAP5-5Q701N2 237 aaPredicted RBP6.4□□□□□ -1.38
H3F3A-204ENST00000366816 BRK1Q8WUW1 75 aa6.26□□□□□ -1.41
H3F3A-204ENST00000366816 AHNAK2Q8IVF2 5795 aa6.25□□□□□ -1.41
H3F3A-204ENST00000366816 KRTAP20-2Q3LI61 65 aa6.19□□□□□ -1.42
H3F3A-204ENST00000366816 KRTAP12-4P60329 112 aa6.17□□□□□ -1.42
H3F3A-204ENST00000366816 KRTAP5-10Q6L8G5 202 aa6.16□□□□□ -1.42
H3F3A-204ENST00000366816 SPRR5A0A1B0GTR4 108 aa6.14□□□□□ -1.43
H3F3A-204ENST00000366816 SYNE1Q8NF91 8797 aaKnown RBP6.12□□□□□ -1.43
H3F3A-204ENST00000366816 KRTAP9-6A8MVA2 160 aa6.12□□□□□ -1.43
H3F3A-204ENST00000366816 KRTAP5-3Q6L8H2 238 aa6.03□□□□□ -1.44
H3F3A-204ENST00000366816 MT1AP04731 61 aa6.02□□□□□ -1.45
H3F3A-204ENST00000366816 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
H3F3A-204ENST00000366816 KRTAP5-7Q6L8G8 165 aa5.97□□□□□ -1.45
H3F3A-204ENST00000366816 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
H3F3A-204ENST00000366816 KRTAP9-4Q9BYQ2 154 aa5.81□□□□□ -1.48
H3F3A-204ENST00000366816 KRTAP5-2Q701N4 177 aa5.78□□□□□ -1.48
H3F3A-204ENST00000366816 KRTAP6-2Q3LI66 62 aa5.71□□□□□ -1.5
H3F3A-204ENST00000366816 PRAC1Q96KF2 57 aa5.69□□□□□ -1.5
H3F3A-204ENST00000366816 KRTAP4-11Q9BYQ6 195 aa5.61□□□□□ -1.51
H3F3A-204ENST00000366816 PRO0628Q9UI54 55 aa5.54□□□□□ -1.52
H3F3A-204ENST00000366816 MT3P25713 68 aa5.49□□□□□ -1.53
H3F3A-204ENST00000366816 KRTAP5-8O75690 187 aa5.42□□□□□ -1.54
H3F3A-204ENST00000366816 OBSCNQ5VST9 7968 aa5.42□□□□□ -1.54
H3F3A-204ENST00000366816 AHNAKQ09666 5890 aaKnown RBP5.28□□□□□ -1.56
H3F3A-204ENST00000366816 KTN1-AS1Q86SY8 53 aa5.27□□□□□ -1.57
H3F3A-204ENST00000366816 MUC5ACP98088 5654 aa5.19□□□□□ -1.58
H3F3A-204ENST00000366816 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
H3F3A-204ENST00000366816 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
H3F3A-204ENST00000366816 MUC5BQ9HC84 5762 aaPredicted RBP5.16□□□□□ -1.58
H3F3A-204ENST00000366816 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
H3F3A-204ENST00000366816 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
H3F3A-204ENST00000366816 LCE1BQ5T7P3 118 aa4.75□□□□□ -1.65
H3F3A-204ENST00000366816 KRTAP4-2Q9BYR5 136 aa4.72□□□□□ -1.65
H3F3A-204ENST00000366816 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
H3F3A-204ENST00000366816 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
H3F3A-204ENST00000366816 LCE1CQ5T751 118 aa4.63□□□□□ -1.67
H3F3A-204ENST00000366816 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
H3F3A-204ENST00000366816 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
H3F3A-204ENST00000366816 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
H3F3A-204ENST00000366816 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
H3F3A-204ENST00000366816 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
H3F3A-204ENST00000366816 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
H3F3A-204ENST00000366816 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
H3F3A-204ENST00000366816 PHGR1C9JFL3 82 aa3.69□□□□□ -1.82
H3F3A-204ENST00000366816 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
H3F3A-204ENST00000366816 PRM1P04553 51 aa3.46□□□□□ -1.86
H3F3A-204ENST00000366816 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
H3F3A-204ENST00000366816 H3BS24 57 aa3.26□□□□□ -1.89
H3F3A-204ENST00000366816 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
H3F3A-204ENST00000366816 INE1O15225 51 aa3.12□□□□□ -1.91
H3F3A-204ENST00000366816 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
H3F3A-204ENST00000366816 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 8.3 ms