RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
NSMCE1-201ENST00000361439 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
NSMCE1-201ENST00000361439 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
NSMCE1-201ENST00000361439 KRTAP12-3P60328 96 aa5.01□□□□□ -1.61
NSMCE1-201ENST00000361439 PP632Q6XCG6 107 aa5.01□□□□□ -1.61
NSMCE1-201ENST00000361439 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
NSMCE1-201ENST00000361439 SPRR2DP22532 72 aa4.98□□□□□ -1.61
NSMCE1-201ENST00000361439 MT1GP13640 62 aa4.96□□□□□ -1.62
NSMCE1-201ENST00000361439 MT1LQ93083 61 aa4.95□□□□□ -1.62
NSMCE1-201ENST00000361439 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
NSMCE1-201ENST00000361439 KRTAP2-3P0C7H8 128 aa4.93□□□□□ -1.62
NSMCE1-201ENST00000361439 KRTAP2-4Q9BYR9 128 aa4.93□□□□□ -1.62
NSMCE1-201ENST00000361439 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
NSMCE1-201ENST00000361439 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
NSMCE1-201ENST00000361439 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
NSMCE1-201ENST00000361439 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
NSMCE1-201ENST00000361439 GPR98Q8WXG9 6306 aa4.84□□□□□ -1.63
NSMCE1-201ENST00000361439 MT1MQ8N339 61 aa4.83□□□□□ -1.64
NSMCE1-201ENST00000361439 LCE3BQ5TA77 95 aa4.82□□□□□ -1.64
NSMCE1-201ENST00000361439 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
NSMCE1-201ENST00000361439 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
NSMCE1-201ENST00000361439 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
NSMCE1-201ENST00000361439 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.67
NSMCE1-201ENST00000361439 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
NSMCE1-201ENST00000361439 DSTQ03001 7570 aaKnown RBP4.65□□□□□ -1.67
NSMCE1-201ENST00000361439 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
NSMCE1-201ENST00000361439 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
NSMCE1-201ENST00000361439 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
NSMCE1-201ENST00000361439 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
NSMCE1-201ENST00000361439 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
NSMCE1-201ENST00000361439 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
NSMCE1-201ENST00000361439 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
NSMCE1-201ENST00000361439 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
NSMCE1-201ENST00000361439 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
NSMCE1-201ENST00000361439 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
NSMCE1-201ENST00000361439 MT4P47944 62 aa4.29□□□□□ -1.72
NSMCE1-201ENST00000361439 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
NSMCE1-201ENST00000361439 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
NSMCE1-201ENST00000361439 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
NSMCE1-201ENST00000361439 MT1AP04731 61 aa4.22□□□□□ -1.73
NSMCE1-201ENST00000361439 KRTAP20-2Q3LI61 65 aa4.14□□□□□ -1.75
NSMCE1-201ENST00000361439 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
NSMCE1-201ENST00000361439 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
NSMCE1-201ENST00000361439 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
NSMCE1-201ENST00000361439 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
NSMCE1-201ENST00000361439 NDUFAF8A1L188 74 aa3.98□□□□□ -1.77
NSMCE1-201ENST00000361439 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
NSMCE1-201ENST00000361439 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
NSMCE1-201ENST00000361439 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
NSMCE1-201ENST00000361439 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.79
NSMCE1-201ENST00000361439 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
NSMCE1-201ENST00000361439 MT3P25713 68 aa3.87□□□□□ -1.79
NSMCE1-201ENST00000361439 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
NSMCE1-201ENST00000361439 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
NSMCE1-201ENST00000361439 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
NSMCE1-201ENST00000361439 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
NSMCE1-201ENST00000361439 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
NSMCE1-201ENST00000361439 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
NSMCE1-201ENST00000361439 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
NSMCE1-201ENST00000361439 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
NSMCE1-201ENST00000361439 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
NSMCE1-201ENST00000361439 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
NSMCE1-201ENST00000361439 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
NSMCE1-201ENST00000361439 INE1O15225 51 aa3.34□□□□□ -1.87
NSMCE1-201ENST00000361439 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
NSMCE1-201ENST00000361439 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
NSMCE1-201ENST00000361439 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
NSMCE1-201ENST00000361439 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
NSMCE1-201ENST00000361439 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
NSMCE1-201ENST00000361439 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
NSMCE1-201ENST00000361439 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
NSMCE1-201ENST00000361439 PRM1P04553 51 aa2.62□□□□□ -1.99
NSMCE1-201ENST00000361439 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
NSMCE1-201ENST00000361439 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
NSMCE1-201ENST00000361439 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
NSMCE1-201ENST00000361439 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
NSMCE1-201ENST00000361439 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 39.4 ms