RNA–Protein interactions for RNA: ENST00000361162.10

RBM39-203, Transcript of RNA binding motif protein 39, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM39, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-203ENST00000361162 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
RBM39-203ENST00000361162 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
RBM39-203ENST00000361162 KRTAP19-7Q3SYF9 63 aa4.16□□□□□ -1.74
RBM39-203ENST00000361162 KRTAP5-9P26371 169 aa4.11□□□□□ -1.75
RBM39-203ENST00000361162 MT1EP04732 61 aa4.07□□□□□ -1.76
RBM39-203ENST00000361162 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
RBM39-203ENST00000361162 MT1LQ93083 61 aa4.05□□□□□ -1.76
RBM39-203ENST00000361162 KRTAP6-3Q3LI67 103 aa4.04□□□□□ -1.76
RBM39-203ENST00000361162 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.02□□□□□ -1.77
RBM39-203ENST00000361162 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
RBM39-203ENST00000361162 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
RBM39-203ENST00000361162 DSTQ03001 7570 aaKnown RBP3.98□□□□□ -1.77
RBM39-203ENST00000361162 MUC12Q9UKN1 5478 aa3.95□□□□□ -1.78
RBM39-203ENST00000361162 MT1GP13640 62 aa3.94□□□□□ -1.78
RBM39-203ENST00000361162 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
RBM39-203ENST00000361162 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
RBM39-203ENST00000361162 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
RBM39-203ENST00000361162 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
RBM39-203ENST00000361162 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
RBM39-203ENST00000361162 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
RBM39-203ENST00000361162 MT1MQ8N339 61 aa3.82□□□□□ -1.8
RBM39-203ENST00000361162 KRTAP4-9Q9BYQ8 210 aa3.81□□□□□ -1.8
RBM39-203ENST00000361162 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
RBM39-203ENST00000361162 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
RBM39-203ENST00000361162 SPRR2EP22531 72 aa3.75□□□□□ -1.81
RBM39-203ENST00000361162 SPRR2BP35325 72 aa3.75□□□□□ -1.81
RBM39-203ENST00000361162 SPRR2AP35326 72 aa3.75□□□□□ -1.81
RBM39-203ENST00000361162 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
RBM39-203ENST00000361162 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
RBM39-203ENST00000361162 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
RBM39-203ENST00000361162 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.83
RBM39-203ENST00000361162 SPRR2DP22532 72 aa3.64□□□□□ -1.83
RBM39-203ENST00000361162 NEBP20929 6669 aa3.64□□□□□ -1.83
RBM39-203ENST00000361162 MDN1Q9NU22 5596 aa3.62□□□□□ -1.83
RBM39-203ENST00000361162 PRM1P04553 51 aa3.58□□□□□ -1.84
RBM39-203ENST00000361162 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
RBM39-203ENST00000361162 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
RBM39-203ENST00000361162 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
RBM39-203ENST00000361162 KRTAP4-6Q9BYQ5 205 aa3.53□□□□□ -1.84
RBM39-203ENST00000361162 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
RBM39-203ENST00000361162 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
RBM39-203ENST00000361162 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
RBM39-203ENST00000361162 MT1AP04731 61 aa3.46□□□□□ -1.86
RBM39-203ENST00000361162 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
RBM39-203ENST00000361162 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
RBM39-203ENST00000361162 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
RBM39-203ENST00000361162 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
RBM39-203ENST00000361162 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
RBM39-203ENST00000361162 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
RBM39-203ENST00000361162 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
RBM39-203ENST00000361162 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
RBM39-203ENST00000361162 MT3P25713 68 aa3.1□□□□□ -1.91
RBM39-203ENST00000361162 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
RBM39-203ENST00000361162 MT4P47944 62 aa3.01□□□□□ -1.93
RBM39-203ENST00000361162 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.94
RBM39-203ENST00000361162 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
RBM39-203ENST00000361162 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
RBM39-203ENST00000361162 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
RBM39-203ENST00000361162 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
RBM39-203ENST00000361162 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
RBM39-203ENST00000361162 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
RBM39-203ENST00000361162 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
RBM39-203ENST00000361162 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
RBM39-203ENST00000361162 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
RBM39-203ENST00000361162 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
RBM39-203ENST00000361162 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
RBM39-203ENST00000361162 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
RBM39-203ENST00000361162 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
RBM39-203ENST00000361162 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
RBM39-203ENST00000361162 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
RBM39-203ENST00000361162 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
RBM39-203ENST00000361162 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
RBM39-203ENST00000361162 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
RBM39-203ENST00000361162 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
RBM39-203ENST00000361162 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
RBM39-203ENST00000361162 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
RBM39-203ENST00000361162 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 53 ms