RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 KRTAP19-4Q3LI73 84 aa6.61□□□□□ -1.35
PDLIM7-203ENST00000359895 KMT2DO14686 5537 aa6.52□□□□□ -1.37
PDLIM7-203ENST00000359895 MT1EP04732 61 aa6.52□□□□□ -1.37
PDLIM7-203ENST00000359895 MUC12Q9UKN1 5478 aa6.48□□□□□ -1.37
PDLIM7-203ENST00000359895 MT1LQ93083 61 aa6.44□□□□□ -1.38
PDLIM7-203ENST00000359895 NEBP20929 6669 aa6.39□□□□□ -1.39
PDLIM7-203ENST00000359895 KRTAP5-9P26371 169 aa6.37□□□□□ -1.39
PDLIM7-203ENST00000359895 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
PDLIM7-203ENST00000359895 MDN1Q9NU22 5596 aa6.27□□□□□ -1.41
PDLIM7-203ENST00000359895 KRTAP9-6A8MVA2 160 aa6.24□□□□□ -1.41
PDLIM7-203ENST00000359895 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
PDLIM7-203ENST00000359895 INE1O15225 51 aa6.19□□□□□ -1.42
PDLIM7-203ENST00000359895 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
PDLIM7-203ENST00000359895 MT1GP13640 62 aa6.18□□□□□ -1.42
PDLIM7-203ENST00000359895 KRTAP20-1Q3LI63 56 aa6.18□□□□□ -1.42
PDLIM7-203ENST00000359895 MT1MQ8N339 61 aa6.11□□□□□ -1.43
PDLIM7-203ENST00000359895 SPRR2EP22531 72 aa6.1□□□□□ -1.43
PDLIM7-203ENST00000359895 SPRR2BP35325 72 aa6.1□□□□□ -1.43
PDLIM7-203ENST00000359895 SPRR2AP35326 72 aa6.1□□□□□ -1.43
PDLIM7-203ENST00000359895 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
PDLIM7-203ENST00000359895 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
PDLIM7-203ENST00000359895 LCE1AQ5T7P2 110 aa6.01□□□□□ -1.45
PDLIM7-203ENST00000359895 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
PDLIM7-203ENST00000359895 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
PDLIM7-203ENST00000359895 KRTAP2-1Q9BYU5 128 aa5.98□□□□□ -1.45
PDLIM7-203ENST00000359895 SPRR2DP22532 72 aa5.9□□□□□ -1.46
PDLIM7-203ENST00000359895 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
PDLIM7-203ENST00000359895 KRTAP2-2Q9BYT5 123 aa5.82□□□□□ -1.48
PDLIM7-203ENST00000359895 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
PDLIM7-203ENST00000359895 DSTQ03001 7570 aaKnown RBP5.63□□□□□ -1.51
PDLIM7-203ENST00000359895 MT1AP04731 61 aa5.49□□□□□ -1.53
PDLIM7-203ENST00000359895 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
PDLIM7-203ENST00000359895 KRTAP6-1Q3LI64 71 aa5.42□□□□□ -1.54
PDLIM7-203ENST00000359895 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
PDLIM7-203ENST00000359895 LCE4AQ5TA78 99 aa5.21□□□□□ -1.57
PDLIM7-203ENST00000359895 LCE1DQ5T752 114 aa5.21□□□□□ -1.58
PDLIM7-203ENST00000359895 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
PDLIM7-203ENST00000359895 GPR98Q8WXG9 6306 aa5.16□□□□□ -1.58
PDLIM7-203ENST00000359895 MT4P47944 62 aa5.15□□□□□ -1.59
PDLIM7-203ENST00000359895 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
PDLIM7-203ENST00000359895 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
PDLIM7-203ENST00000359895 KRTAP5-4Q6L8H1 288 aa5.12□□□□□ -1.59
PDLIM7-203ENST00000359895 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
PDLIM7-203ENST00000359895 LCE3DQ9BYE3 92 aa5.04□□□□□ -1.6
PDLIM7-203ENST00000359895 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
PDLIM7-203ENST00000359895 MT3P25713 68 aa4.96□□□□□ -1.62
PDLIM7-203ENST00000359895 LCE3EQ5T5B0 92 aa4.95□□□□□ -1.62
PDLIM7-203ENST00000359895 AHNAK2Q8IVF2 5795 aa4.94□□□□□ -1.62
PDLIM7-203ENST00000359895 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
PDLIM7-203ENST00000359895 KRTAP20-2Q3LI61 65 aa4.84□□□□□ -1.63
PDLIM7-203ENST00000359895 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
PDLIM7-203ENST00000359895 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
PDLIM7-203ENST00000359895 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
PDLIM7-203ENST00000359895 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
PDLIM7-203ENST00000359895 PRM1P04553 51 aa4.49□□□□□ -1.69
PDLIM7-203ENST00000359895 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
PDLIM7-203ENST00000359895 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.7
PDLIM7-203ENST00000359895 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
PDLIM7-203ENST00000359895 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
PDLIM7-203ENST00000359895 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
PDLIM7-203ENST00000359895 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
PDLIM7-203ENST00000359895 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
PDLIM7-203ENST00000359895 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
PDLIM7-203ENST00000359895 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
PDLIM7-203ENST00000359895 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
PDLIM7-203ENST00000359895 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
PDLIM7-203ENST00000359895 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
PDLIM7-203ENST00000359895 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
PDLIM7-203ENST00000359895 KRTAP21-2Q3LI59 83 aa3.54□□□□□ -1.84
PDLIM7-203ENST00000359895 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
PDLIM7-203ENST00000359895 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
PDLIM7-203ENST00000359895 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
PDLIM7-203ENST00000359895 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
PDLIM7-203ENST00000359895 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
PDLIM7-203ENST00000359895 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
PDLIM7-203ENST00000359895 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
PDLIM7-203ENST00000359895 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms