RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 MACF1Q9UPN3 7388 aaKnown RBP2.6□□□□□ -1.99
APP-206ENST00000359726 LOC100996750A0A140TA64 210 aa2.59□□□□□ -1.99
APP-206ENST00000359726 KRTAP4-6Q9BYQ5 205 aa2.59□□□□□ -1.99
APP-206ENST00000359726 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
APP-206ENST00000359726 KRTAP4-7Q9BYR0 210 aa2.56□□□□□ -2
APP-206ENST00000359726 KRTAP4-8A0A0G2JLE6 195 aa2.53□□□□□ -2
APP-206ENST00000359726 KRTAP4-8Q9BYQ9 185 aa2.53□□□□□ -2
APP-206ENST00000359726 KRTAP19-4Q3LI73 84 aa2.52□□□□□ -2.01
APP-206ENST00000359726 MT1LQ93083 61 aa2.49□□□□□ -2.01
APP-206ENST00000359726 KRTAP19-6Q3LI70 58 aa2.46□□□□□ -2.01
APP-206ENST00000359726 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
APP-206ENST00000359726 MT1EP04732 61 aa2.44□□□□□ -2.02
APP-206ENST00000359726 NEBP20929 6669 aa2.43□□□□□ -2.02
APP-206ENST00000359726 MUC12Q9UKN1 5478 aa2.4□□□□□ -2.03
APP-206ENST00000359726 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
APP-206ENST00000359726 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
APP-206ENST00000359726 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
APP-206ENST00000359726 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
APP-206ENST00000359726 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
APP-206ENST00000359726 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
APP-206ENST00000359726 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
APP-206ENST00000359726 MT1GP13640 62 aa2.28□□□□□ -2.04
APP-206ENST00000359726 MT1AP04731 61 aa2.27□□□□□ -2.05
APP-206ENST00000359726 SPRR2EP22531 72 aa2.25□□□□□ -2.05
APP-206ENST00000359726 SPRR2BP35325 72 aa2.25□□□□□ -2.05
APP-206ENST00000359726 SPRR2AP35326 72 aa2.25□□□□□ -2.05
APP-206ENST00000359726 SPRR2FQ96RM1 72 aa2.25□□□□□ -2.05
APP-206ENST00000359726 MT1MQ8N339 61 aa2.25□□□□□ -2.05
APP-206ENST00000359726 KRTAP5-9P26371 169 aa2.24□□□□□ -2.05
APP-206ENST00000359726 KRTAP4-12Q9BQ66 201 aa2.23□□□□□ -2.05
APP-206ENST00000359726 KRTAP4-9Q9BYQ8 210 aa2.22□□□□□ -2.05
APP-206ENST00000359726 SYNE1Q8NF91 8797 aaKnown RBP2.2□□□□□ -2.06
APP-206ENST00000359726 KRTAP2-2Q9BYT5 123 aa2.19□□□□□ -2.06
APP-206ENST00000359726 LCE3BQ5TA77 95 aa2.19□□□□□ -2.06
APP-206ENST00000359726 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
APP-206ENST00000359726 PRM1P04553 51 aa2.17□□□□□ -2.06
APP-206ENST00000359726 SPRR2DP22532 72 aa2.17□□□□□ -2.06
APP-206ENST00000359726 KRTAP9-9Q9BYP9 154 aa2.15□□□□□ -2.07
APP-206ENST00000359726 KRTAP9-4Q9BYQ2 154 aa2.15□□□□□ -2.07
APP-206ENST00000359726 LCE1AQ5T7P2 110 aa2.15□□□□□ -2.07
APP-206ENST00000359726 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
APP-206ENST00000359726 LCE5AQ5TCM9 118 aa2.13□□□□□ -2.07
APP-206ENST00000359726 KRTAP6-1Q3LI64 71 aa2.12□□□□□ -2.07
APP-206ENST00000359726 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
APP-206ENST00000359726 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
APP-206ENST00000359726 LCE1DQ5T752 114 aa2.09□□□□□ -2.07
APP-206ENST00000359726 KRTAP6-2Q3LI66 62 aa2.05□□□□□ -2.08
APP-206ENST00000359726 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
APP-206ENST00000359726 KRTAP4-2Q9BYR5 136 aa1.99□□□□□ -2.09
APP-206ENST00000359726 MT4P47944 62 aa1.95□□□□□ -2.1
APP-206ENST00000359726 KRTAP4-11Q9BYQ6 195 aa1.95□□□□□ -2.1
APP-206ENST00000359726 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
APP-206ENST00000359726 KRTAP5-3Q6L8H2 238 aa1.93□□□□□ -2.1
APP-206ENST00000359726 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
APP-206ENST00000359726 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
APP-206ENST00000359726 LCE4AQ5TA78 99 aa1.85□□□□□ -2.11
APP-206ENST00000359726 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
APP-206ENST00000359726 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
APP-206ENST00000359726 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
APP-206ENST00000359726 MT3P25713 68 aa1.76□□□□□ -2.13
APP-206ENST00000359726 LCE1FQ5T754 118 aa1.76□□□□□ -2.13
APP-206ENST00000359726 KRTAP5-4Q6L8H1 288 aa1.74□□□□□ -2.13
APP-206ENST00000359726 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.14
APP-206ENST00000359726 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
APP-206ENST00000359726 KRTAP5-2Q701N4 177 aa1.62□□□□□ -2.15
APP-206ENST00000359726 KRTAP5-1Q6L8H4 278 aa1.61□□□□□ -2.15
APP-206ENST00000359726 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
APP-206ENST00000359726 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
APP-206ENST00000359726 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
APP-206ENST00000359726 LCE1BQ5T7P3 118 aa1.47□□□□□ -2.17
APP-206ENST00000359726 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
APP-206ENST00000359726 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.41□□□□□ -2.18
APP-206ENST00000359726 LCE1CQ5T751 118 aa1.39□□□□□ -2.19
APP-206ENST00000359726 KRTAP5-11Q6L8G4 156 aa1.27□□□□□ -2.21
APP-206ENST00000359726 KRTAP4-4Q9BYR3 166 aa1.26□□□□□ -2.21
APP-206ENST00000359726 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
APP-206ENST00000359726 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 79.4 ms