RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
RPE-202ENST00000359429 KRTAP10-7P60409 375 aaPredicted RBP4.21□□□□□ -1.73
RPE-202ENST00000359429 PRO2289Q9P1D8 64 aa4.2□□□□□ -1.74
RPE-202ENST00000359429 INE1O15225 51 aa4.13□□□□□ -1.75
RPE-202ENST00000359429 KMT2DO14686 5537 aa4.06□□□□□ -1.76
RPE-202ENST00000359429 KRTAP19-5Q3LI72 72 aa4.04□□□□□ -1.76
RPE-202ENST00000359429 USH2AO75445 5202 aa4.04□□□□□ -1.76
RPE-202ENST00000359429 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
RPE-202ENST00000359429 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
RPE-202ENST00000359429 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
RPE-202ENST00000359429 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
RPE-202ENST00000359429 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
RPE-202ENST00000359429 KRTAP2-3P0C7H8 128 aa3.8□□□□□ -1.8
RPE-202ENST00000359429 KRTAP2-4Q9BYR9 128 aa3.8□□□□□ -1.8
RPE-202ENST00000359429 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
RPE-202ENST00000359429 CRCT1Q9UGL9 99 aa3.77□□□□□ -1.81
RPE-202ENST00000359429 MT1LQ93083 61 aa3.71□□□□□ -1.82
RPE-202ENST00000359429 MT1EP04732 61 aa3.68□□□□□ -1.82
RPE-202ENST00000359429 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
RPE-202ENST00000359429 KRTAP19-6Q3LI70 58 aa3.65□□□□□ -1.82
RPE-202ENST00000359429 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
RPE-202ENST00000359429 SSPOA2VEC9 5147 aa3.62□□□□□ -1.83
RPE-202ENST00000359429 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
RPE-202ENST00000359429 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
RPE-202ENST00000359429 FSIP2Q5CZC0 6907 aa3.52□□□□□ -1.85
RPE-202ENST00000359429 MT1GP13640 62 aa3.51□□□□□ -1.85
RPE-202ENST00000359429 FCGBPQ9Y6R7 5405 aaPredicted RBP3.51□□□□□ -1.85
RPE-202ENST00000359429 MUC12Q9UKN1 5478 aa3.49□□□□□ -1.85
RPE-202ENST00000359429 MT1MQ8N339 61 aa3.43□□□□□ -1.86
RPE-202ENST00000359429 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
RPE-202ENST00000359429 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
RPE-202ENST00000359429 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.87
RPE-202ENST00000359429 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
RPE-202ENST00000359429 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
RPE-202ENST00000359429 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
RPE-202ENST00000359429 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
RPE-202ENST00000359429 SPRR2FQ96RM1 72 aa3.24□□□□□ -1.89
RPE-202ENST00000359429 MT3P25713 68 aa3.22□□□□□ -1.89
RPE-202ENST00000359429 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
RPE-202ENST00000359429 KRTAP5-9P26371 169 aa3.2□□□□□ -1.9
RPE-202ENST00000359429 SYNE2Q8WXH0 6885 aaKnown RBP3.19□□□□□ -1.9
RPE-202ENST00000359429 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
RPE-202ENST00000359429 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
RPE-202ENST00000359429 NEBP20929 6669 aa3.16□□□□□ -1.9
RPE-202ENST00000359429 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
RPE-202ENST00000359429 MT1AP04731 61 aa3.15□□□□□ -1.91
RPE-202ENST00000359429 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
RPE-202ENST00000359429 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
RPE-202ENST00000359429 MDN1Q9NU22 5596 aa3.09□□□□□ -1.91
RPE-202ENST00000359429 SPRR2EP22531 72 aa3.08□□□□□ -1.92
RPE-202ENST00000359429 SPRR2BP35325 72 aa3.08□□□□□ -1.92
RPE-202ENST00000359429 SPRR2AP35326 72 aa3.08□□□□□ -1.92
RPE-202ENST00000359429 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
RPE-202ENST00000359429 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
RPE-202ENST00000359429 PRM1P04553 51 aa3.05□□□□□ -1.92
RPE-202ENST00000359429 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
RPE-202ENST00000359429 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
RPE-202ENST00000359429 SPRR2DP22532 72 aa2.97□□□□□ -1.93
RPE-202ENST00000359429 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
RPE-202ENST00000359429 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
RPE-202ENST00000359429 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
RPE-202ENST00000359429 MT4P47944 62 aa2.57□□□□□ -2
RPE-202ENST00000359429 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
RPE-202ENST00000359429 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
RPE-202ENST00000359429 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
RPE-202ENST00000359429 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
RPE-202ENST00000359429 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
RPE-202ENST00000359429 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
RPE-202ENST00000359429 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
RPE-202ENST00000359429 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
RPE-202ENST00000359429 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
RPE-202ENST00000359429 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
RPE-202ENST00000359429 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
RPE-202ENST00000359429 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
RPE-202ENST00000359429 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
RPE-202ENST00000359429 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
RPE-202ENST00000359429 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 116 ms