RNA–Protein interactions for RNA: ENST00000358064.3

HIST4H4-201, Transcript of histone cluster 4 H4, humanhuman

TSL 1 (best)

Gene HIST4H4, Length 1,918 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-201ENST00000358064 USH2AO75445 5202 aa4.69□□□□□ -1.66
HIST4H4-201ENST00000358064 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
HIST4H4-201ENST00000358064 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
HIST4H4-201ENST00000358064 SPRR2GQ9BYE4 73 aa4.58□□□□□ -1.68
HIST4H4-201ENST00000358064 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
HIST4H4-201ENST00000358064 KRTAP19-8Q3LI54 63 aa4.48□□□□□ -1.69
HIST4H4-201ENST00000358064 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.7
HIST4H4-201ENST00000358064 MT1BP07438 61 aa4.44□□□□□ -1.7
HIST4H4-201ENST00000358064 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
HIST4H4-201ENST00000358064 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
HIST4H4-201ENST00000358064 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
HIST4H4-201ENST00000358064 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
HIST4H4-201ENST00000358064 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
HIST4H4-201ENST00000358064 MT1XP80297 61 aa4.26□□□□□ -1.73
HIST4H4-201ENST00000358064 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
HIST4H4-201ENST00000358064 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
HIST4H4-201ENST00000358064 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
HIST4H4-201ENST00000358064 KMT2DO14686 5537 aa4.1□□□□□ -1.75
HIST4H4-201ENST00000358064 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.76
HIST4H4-201ENST00000358064 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
HIST4H4-201ENST00000358064 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
HIST4H4-201ENST00000358064 KRTAP5-9P26371 169 aa4.01□□□□□ -1.77
HIST4H4-201ENST00000358064 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
HIST4H4-201ENST00000358064 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
HIST4H4-201ENST00000358064 SPRR2FQ96RM1 72 aa3.97□□□□□ -1.77
HIST4H4-201ENST00000358064 NEBP20929 6669 aa3.92□□□□□ -1.78
HIST4H4-201ENST00000358064 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
HIST4H4-201ENST00000358064 KRTAP2-3P0C7H8 128 aa3.9□□□□□ -1.78
HIST4H4-201ENST00000358064 KRTAP2-4Q9BYR9 128 aa3.9□□□□□ -1.78
HIST4H4-201ENST00000358064 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.78
HIST4H4-201ENST00000358064 SPRR2EP22531 72 aa3.86□□□□□ -1.79
HIST4H4-201ENST00000358064 SPRR2BP35325 72 aa3.86□□□□□ -1.79
HIST4H4-201ENST00000358064 SPRR2AP35326 72 aa3.86□□□□□ -1.79
HIST4H4-201ENST00000358064 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
HIST4H4-201ENST00000358064 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
HIST4H4-201ENST00000358064 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
HIST4H4-201ENST00000358064 MT1EP04732 61 aa3.75□□□□□ -1.81
HIST4H4-201ENST00000358064 SPRR2DP22532 72 aa3.72□□□□□ -1.81
HIST4H4-201ENST00000358064 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
HIST4H4-201ENST00000358064 MT1LQ93083 61 aa3.64□□□□□ -1.83
HIST4H4-201ENST00000358064 DSTQ03001 7570 aaKnown RBP3.64□□□□□ -1.83
HIST4H4-201ENST00000358064 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
HIST4H4-201ENST00000358064 MT1GP13640 62 aa3.59□□□□□ -1.83
HIST4H4-201ENST00000358064 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
HIST4H4-201ENST00000358064 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
HIST4H4-201ENST00000358064 MT1MQ8N339 61 aa3.54□□□□□ -1.84
HIST4H4-201ENST00000358064 KRTAP12-4P60329 112 aa3.5□□□□□ -1.85
HIST4H4-201ENST00000358064 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
HIST4H4-201ENST00000358064 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
HIST4H4-201ENST00000358064 MT4P47944 62 aa3.27□□□□□ -1.89
HIST4H4-201ENST00000358064 MT1AP04731 61 aa3.25□□□□□ -1.89
HIST4H4-201ENST00000358064 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
HIST4H4-201ENST00000358064 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
HIST4H4-201ENST00000358064 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
HIST4H4-201ENST00000358064 PRM1P04553 51 aa3.14□□□□□ -1.91
HIST4H4-201ENST00000358064 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
HIST4H4-201ENST00000358064 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
HIST4H4-201ENST00000358064 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
HIST4H4-201ENST00000358064 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
HIST4H4-201ENST00000358064 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
HIST4H4-201ENST00000358064 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
HIST4H4-201ENST00000358064 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
HIST4H4-201ENST00000358064 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
HIST4H4-201ENST00000358064 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
HIST4H4-201ENST00000358064 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
HIST4H4-201ENST00000358064 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
HIST4H4-201ENST00000358064 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
HIST4H4-201ENST00000358064 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
HIST4H4-201ENST00000358064 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -1.99
HIST4H4-201ENST00000358064 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
HIST4H4-201ENST00000358064 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
HIST4H4-201ENST00000358064 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
HIST4H4-201ENST00000358064 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
HIST4H4-201ENST00000358064 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
HIST4H4-201ENST00000358064 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
HIST4H4-201ENST00000358064 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.09
HIST4H4-201ENST00000358064 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
HIST4H4-201ENST00000358064 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 54.2 ms