RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 MT1XP80297 61 aa1.66□□□□□ -2.14
CNOT4-202ENST00000356162 KRTAP13-4Q3LI77 160 aa1.66□□□□□ -2.14
CNOT4-202ENST00000356162 A0A1B0GU69 56 aa1.65□□□□□ -2.15
CNOT4-202ENST00000356162 BRK1Q8WUW1 75 aa1.65□□□□□ -2.15
CNOT4-202ENST00000356162 A0A1B0GU33 70 aa1.64□□□□□ -2.15
CNOT4-202ENST00000356162 KRTAP6-3Q3LI67 103 aa1.64□□□□□ -2.15
CNOT4-202ENST00000356162 PRR15LQ9BU68 103 aa1.64□□□□□ -2.15
CNOT4-202ENST00000356162 KRTAP12-2P59991 146 aa1.63□□□□□ -2.15
CNOT4-202ENST00000356162 LINC01558Q9Y6Z2 57 aa1.63□□□□□ -2.15
CNOT4-202ENST00000356162 MACF1Q9UPN3 7388 aaKnown RBP1.63□□□□□ -2.15
CNOT4-202ENST00000356162 SPATA8Q6RVD6 105 aa1.61□□□□□ -2.15
CNOT4-202ENST00000356162 A0A0D9SG42 100 aa1.61□□□□□ -2.15
CNOT4-202ENST00000356162 NDUFAF8A1L188 74 aa1.6□□□□□ -2.15
CNOT4-202ENST00000356162 CAMK2N1Q7Z7J9 78 aa1.6□□□□□ -2.15
CNOT4-202ENST00000356162 KTN1-AS1Q86SY8 53 aa1.6□□□□□ -2.15
CNOT4-202ENST00000356162 KRTAP12-1P59990 96 aa1.59□□□□□ -2.15
CNOT4-202ENST00000356162 LUZP6Q538Z0 58 aa1.58□□□□□ -2.16
CNOT4-202ENST00000356162 SPINT4Q6UDR6 99 aa1.58□□□□□ -2.16
CNOT4-202ENST00000356162 PSPHP1O15172 72 aa1.58□□□□□ -2.16
CNOT4-202ENST00000356162 KRTAP8-1Q8IUC2 63 aa1.57□□□□□ -2.16
CNOT4-202ENST00000356162 A8MU10 97 aa1.57□□□□□ -2.16
CNOT4-202ENST00000356162 UQCR11O14957 56 aa1.57□□□□□ -2.16
CNOT4-202ENST00000356162 Q1T7F1 81 aa1.56□□□□□ -2.16
CNOT4-202ENST00000356162 LCE3EQ5T5B0 92 aa1.56□□□□□ -2.16
CNOT4-202ENST00000356162 SPRR2FQ96RM1 72 aa1.55□□□□□ -2.16
CNOT4-202ENST00000356162 SYNE2Q8WXH0 6885 aaKnown RBP1.54□□□□□ -2.16
CNOT4-202ENST00000356162 MIR22HGQ0VDD5 57 aa1.54□□□□□ -2.16
CNOT4-202ENST00000356162 MUC12Q9UKN1 5478 aa1.53□□□□□ -2.16
CNOT4-202ENST00000356162 A6NED7 52 aa1.53□□□□□ -2.16
CNOT4-202ENST00000356162 KMT2DO14686 5537 aa1.53□□□□□ -2.16
CNOT4-202ENST00000356162 SPRR2EP22531 72 aa1.52□□□□□ -2.17
CNOT4-202ENST00000356162 SPRR2BP35325 72 aa1.52□□□□□ -2.17
CNOT4-202ENST00000356162 SPRR2AP35326 72 aa1.52□□□□□ -2.17
CNOT4-202ENST00000356162 K7ERS5 55 aa1.51□□□□□ -2.17
CNOT4-202ENST00000356162 C10orf95Q9H7T3 257 aa1.51□□□□□ -2.17
CNOT4-202ENST00000356162 TNP1P09430 55 aa1.51□□□□□ -2.17
CNOT4-202ENST00000356162 MDN1Q9NU22 5596 aa1.5□□□□□ -2.17
CNOT4-202ENST00000356162 KRTAP20-1Q3LI63 56 aa1.49□□□□□ -2.17
CNOT4-202ENST00000356162 KRTAP19-7Q3SYF9 63 aa1.49□□□□□ -2.17
CNOT4-202ENST00000356162 LCE3AQ5TA76 89 aa1.49□□□□□ -2.17
CNOT4-202ENST00000356162 KRTAP5-7Q6L8G8 165 aa1.49□□□□□ -2.17
CNOT4-202ENST00000356162 MT1EP04732 61 aa1.48□□□□□ -2.17
CNOT4-202ENST00000356162 SPRR2DP22532 72 aa1.47□□□□□ -2.17
CNOT4-202ENST00000356162 KRTAP2-3P0C7H8 128 aa1.47□□□□□ -2.17
CNOT4-202ENST00000356162 KRTAP25-1Q3LHN0 102 aa1.47□□□□□ -2.17
CNOT4-202ENST00000356162 KRTAP2-4Q9BYR9 128 aa1.47□□□□□ -2.17
CNOT4-202ENST00000356162 KRTAP19-5Q3LI72 72 aa1.46□□□□□ -2.18
CNOT4-202ENST00000356162 CDC42SE1Q9NRR8 79 aa1.46□□□□□ -2.18
CNOT4-202ENST00000356162 KRTAP19-3Q7Z4W3 81 aa1.45□□□□□ -2.18
CNOT4-202ENST00000356162 MT1GP13640 62 aa1.42□□□□□ -2.18
CNOT4-202ENST00000356162 MT1LQ93083 61 aa1.42□□□□□ -2.18
CNOT4-202ENST00000356162 KRTAP2-1Q9BYU5 128 aa1.42□□□□□ -2.18
CNOT4-202ENST00000356162 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
CNOT4-202ENST00000356162 ROMO1P60602 79 aa1.42□□□□□ -2.18
CNOT4-202ENST00000356162 PP632Q6XCG6 107 aa1.42□□□□□ -2.18
CNOT4-202ENST00000356162 KRTAP12-3P60328 96 aa1.41□□□□□ -2.18
CNOT4-202ENST00000356162 MT1MQ8N339 61 aa1.4□□□□□ -2.19
CNOT4-202ENST00000356162 LCE1CQ5T751 118 aa1.3□□□□□ -2.2
CNOT4-202ENST00000356162 LCE1BQ5T7P3 118 aa1.3□□□□□ -2.2
CNOT4-202ENST00000356162 LCE3DQ9BYE3 92 aa1.29□□□□□ -2.2
CNOT4-202ENST00000356162 DSTQ03001 7570 aaKnown RBP1.29□□□□□ -2.2
CNOT4-202ENST00000356162 MT4P47944 62 aa1.26□□□□□ -2.21
CNOT4-202ENST00000356162 SPRR5A0A1B0GTR4 108 aa1.24□□□□□ -2.21
CNOT4-202ENST00000356162 MT1AP04731 61 aa1.22□□□□□ -2.21
CNOT4-202ENST00000356162 KRTAP12-4P60329 112 aa1.22□□□□□ -2.21
CNOT4-202ENST00000356162 KRTAP20-2Q3LI61 65 aa1.22□□□□□ -2.21
CNOT4-202ENST00000356162 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
CNOT4-202ENST00000356162 KRTAP6-1Q3LI64 71 aa1.19□□□□□ -2.22
CNOT4-202ENST00000356162 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
CNOT4-202ENST00000356162 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
CNOT4-202ENST00000356162 KRTAP6-2Q3LI66 62 aa1.12□□□□□ -2.23
CNOT4-202ENST00000356162 INE1O15225 51 aa1.08□□□□□ -2.24
CNOT4-202ENST00000356162 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
CNOT4-202ENST00000356162 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
CNOT4-202ENST00000356162 PRM1P04553 51 aa0.72□□□□□ -2.29
CNOT4-202ENST00000356162 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
CNOT4-202ENST00000356162 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 79.3 ms