RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 MT1GP13640 62 aa5.34□□□□□ -1.55
STRN3-201ENST00000355683 KRTAP4-3Q9BYR4 195 aa5.32□□□□□ -1.56
STRN3-201ENST00000355683 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
STRN3-201ENST00000355683 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
STRN3-201ENST00000355683 SSPOA2VEC9 5147 aa5.21□□□□□ -1.57
STRN3-201ENST00000355683 KRTAP9-6A0A140TA67 174 aa5.2□□□□□ -1.58
STRN3-201ENST00000355683 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
STRN3-201ENST00000355683 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
STRN3-201ENST00000355683 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
STRN3-201ENST00000355683 KRTAP19-7Q3SYF9 63 aa5.08□□□□□ -1.6
STRN3-201ENST00000355683 MT1LQ93083 61 aa5.08□□□□□ -1.6
STRN3-201ENST00000355683 SPRR2EP22531 72 aa5.06□□□□□ -1.6
STRN3-201ENST00000355683 SPRR2BP35325 72 aa5.06□□□□□ -1.6
STRN3-201ENST00000355683 SPRR2AP35326 72 aa5.06□□□□□ -1.6
STRN3-201ENST00000355683 MT1EP04732 61 aa5.04□□□□□ -1.6
STRN3-201ENST00000355683 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
STRN3-201ENST00000355683 MACF1Q9UPN3 7388 aaKnown RBP4.96□□□□□ -1.62
STRN3-201ENST00000355683 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
STRN3-201ENST00000355683 SPRR2DP22532 72 aa4.86□□□□□ -1.63
STRN3-201ENST00000355683 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.64
STRN3-201ENST00000355683 KRTAP9-7A8MTY7 169 aa4.83□□□□□ -1.64
STRN3-201ENST00000355683 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
STRN3-201ENST00000355683 MT1MQ8N339 61 aa4.8□□□□□ -1.64
STRN3-201ENST00000355683 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
STRN3-201ENST00000355683 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
STRN3-201ENST00000355683 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
STRN3-201ENST00000355683 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
STRN3-201ENST00000355683 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
STRN3-201ENST00000355683 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
STRN3-201ENST00000355683 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
STRN3-201ENST00000355683 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
STRN3-201ENST00000355683 PRM1P04553 51 aa4.54□□□□□ -1.68
STRN3-201ENST00000355683 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
STRN3-201ENST00000355683 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
STRN3-201ENST00000355683 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
STRN3-201ENST00000355683 MUC19Q7Z5P9 8384 aa4.39□□□□□ -1.71
STRN3-201ENST00000355683 MT4P47944 62 aa4.38□□□□□ -1.71
STRN3-201ENST00000355683 KRTAP20-1Q3LI63 56 aa4.38□□□□□ -1.71
STRN3-201ENST00000355683 NEBP20929 6669 aa4.21□□□□□ -1.74
STRN3-201ENST00000355683 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
STRN3-201ENST00000355683 MT1AP04731 61 aa4.2□□□□□ -1.74
STRN3-201ENST00000355683 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
STRN3-201ENST00000355683 MT3P25713 68 aa4.14□□□□□ -1.75
STRN3-201ENST00000355683 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
STRN3-201ENST00000355683 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
STRN3-201ENST00000355683 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
STRN3-201ENST00000355683 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
STRN3-201ENST00000355683 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
STRN3-201ENST00000355683 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
STRN3-201ENST00000355683 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
STRN3-201ENST00000355683 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
STRN3-201ENST00000355683 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
STRN3-201ENST00000355683 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
STRN3-201ENST00000355683 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
STRN3-201ENST00000355683 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
STRN3-201ENST00000355683 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
STRN3-201ENST00000355683 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
STRN3-201ENST00000355683 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
STRN3-201ENST00000355683 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
STRN3-201ENST00000355683 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
STRN3-201ENST00000355683 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
STRN3-201ENST00000355683 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
STRN3-201ENST00000355683 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
STRN3-201ENST00000355683 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
STRN3-201ENST00000355683 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
STRN3-201ENST00000355683 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.92
STRN3-201ENST00000355683 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
STRN3-201ENST00000355683 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
STRN3-201ENST00000355683 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.96
STRN3-201ENST00000355683 KRTAP5-7Q6L8G8 165 aa2.65□□□□□ -1.99
STRN3-201ENST00000355683 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
STRN3-201ENST00000355683 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
STRN3-201ENST00000355683 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
STRN3-201ENST00000355683 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
STRN3-201ENST00000355683 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
STRN3-201ENST00000355683 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
STRN3-201ENST00000355683 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 79.7 ms