RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
RBFOX1-203ENST00000355637 KRTAP2-3P0C7H8 128 aa3.12□□□□□ -1.91
RBFOX1-203ENST00000355637 KRTAP10-7P60409 375 aaPredicted RBP3.12□□□□□ -1.91
RBFOX1-203ENST00000355637 KRTAP2-4Q9BYR9 128 aa3.12□□□□□ -1.91
RBFOX1-203ENST00000355637 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
RBFOX1-203ENST00000355637 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
RBFOX1-203ENST00000355637 KRTAP9-3Q9BYQ3 159 aa3.08□□□□□ -1.92
RBFOX1-203ENST00000355637 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
RBFOX1-203ENST00000355637 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
RBFOX1-203ENST00000355637 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
RBFOX1-203ENST00000355637 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
RBFOX1-203ENST00000355637 USH2AO75445 5202 aa3.02□□□□□ -1.93
RBFOX1-203ENST00000355637 KRTAP19-5Q3LI72 72 aa3.01□□□□□ -1.93
RBFOX1-203ENST00000355637 KMT2DO14686 5537 aa2.98□□□□□ -1.93
RBFOX1-203ENST00000355637 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
RBFOX1-203ENST00000355637 LCE5AQ5TCM9 118 aa2.96□□□□□ -1.93
RBFOX1-203ENST00000355637 KRTAP9-7A8MTY7 169 aa2.91□□□□□ -1.94
RBFOX1-203ENST00000355637 PRM1P04553 51 aa2.9□□□□□ -1.95
RBFOX1-203ENST00000355637 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
RBFOX1-203ENST00000355637 CRCT1Q9UGL9 99 aa2.85□□□□□ -1.95
RBFOX1-203ENST00000355637 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.96
RBFOX1-203ENST00000355637 KRTAP19-7Q3SYF9 63 aa2.8□□□□□ -1.96
RBFOX1-203ENST00000355637 FSIP2Q5CZC0 6907 aa2.8□□□□□ -1.96
RBFOX1-203ENST00000355637 LCE1FQ5T754 118 aa2.78□□□□□ -1.97
RBFOX1-203ENST00000355637 MT1LQ93083 61 aa2.74□□□□□ -1.97
RBFOX1-203ENST00000355637 MT1EP04732 61 aa2.73□□□□□ -1.97
RBFOX1-203ENST00000355637 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
RBFOX1-203ENST00000355637 SSPOA2VEC9 5147 aa2.71□□□□□ -1.98
RBFOX1-203ENST00000355637 KRTAP19-4Q3LI73 84 aa2.71□□□□□ -1.98
RBFOX1-203ENST00000355637 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
RBFOX1-203ENST00000355637 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
RBFOX1-203ENST00000355637 KRTAP4-3Q9BYR4 195 aa2.66□□□□□ -1.98
RBFOX1-203ENST00000355637 MT1GP13640 62 aa2.64□□□□□ -1.99
RBFOX1-203ENST00000355637 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
RBFOX1-203ENST00000355637 MUC12Q9UKN1 5478 aa2.63□□□□□ -1.99
RBFOX1-203ENST00000355637 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
RBFOX1-203ENST00000355637 KRTAP19-6Q3LI70 58 aa2.62□□□□□ -1.99
RBFOX1-203ENST00000355637 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
RBFOX1-203ENST00000355637 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
RBFOX1-203ENST00000355637 MT1MQ8N339 61 aa2.57□□□□□ -2
RBFOX1-203ENST00000355637 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
RBFOX1-203ENST00000355637 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
RBFOX1-203ENST00000355637 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
RBFOX1-203ENST00000355637 SPRR2FQ96RM1 72 aa2.54□□□□□ -2
RBFOX1-203ENST00000355637 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
RBFOX1-203ENST00000355637 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
RBFOX1-203ENST00000355637 MACF1Q9UPN3 7388 aaKnown RBP2.42□□□□□ -2.02
RBFOX1-203ENST00000355637 MT1AP04731 61 aa2.39□□□□□ -2.03
RBFOX1-203ENST00000355637 KRTAP5-9P26371 169 aa2.37□□□□□ -2.03
RBFOX1-203ENST00000355637 SYNE2Q8WXH0 6885 aaKnown RBP2.37□□□□□ -2.03
RBFOX1-203ENST00000355637 NEBP20929 6669 aa2.37□□□□□ -2.03
RBFOX1-203ENST00000355637 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
RBFOX1-203ENST00000355637 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
RBFOX1-203ENST00000355637 KRTAP6-1Q3LI64 71 aa2.35□□□□□ -2.03
RBFOX1-203ENST00000355637 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
RBFOX1-203ENST00000355637 SPRR2EP22531 72 aa2.29□□□□□ -2.04
RBFOX1-203ENST00000355637 SPRR2BP35325 72 aa2.29□□□□□ -2.04
RBFOX1-203ENST00000355637 SPRR2AP35326 72 aa2.29□□□□□ -2.04
RBFOX1-203ENST00000355637 SPRR2DP22532 72 aa2.18□□□□□ -2.06
RBFOX1-203ENST00000355637 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
RBFOX1-203ENST00000355637 MT3P25713 68 aa2.09□□□□□ -2.07
RBFOX1-203ENST00000355637 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.08
RBFOX1-203ENST00000355637 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
RBFOX1-203ENST00000355637 KRTAP5-1Q6L8H4 278 aa2.06□□□□□ -2.08
RBFOX1-203ENST00000355637 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
RBFOX1-203ENST00000355637 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
RBFOX1-203ENST00000355637 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
RBFOX1-203ENST00000355637 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
RBFOX1-203ENST00000355637 MT4P47944 62 aa1.97□□□□□ -2.09
RBFOX1-203ENST00000355637 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.12
RBFOX1-203ENST00000355637 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
RBFOX1-203ENST00000355637 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
RBFOX1-203ENST00000355637 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
RBFOX1-203ENST00000355637 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
RBFOX1-203ENST00000355637 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
RBFOX1-203ENST00000355637 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
RBFOX1-203ENST00000355637 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 32.5 ms