RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 SPRR2FQ96RM1 72 aa8.9□□□□□ -0.99
CLK2-201ENST00000355560 KRTAP19-3Q7Z4W3 81 aa8.82□□□□□ -1
CLK2-201ENST00000355560 SYNE2Q8WXH0 6885 aaKnown RBP8.81□□□□□ -1
CLK2-201ENST00000355560 MT1GP13640 62 aa8.74□□□□□ -1.01
CLK2-201ENST00000355560 KRTAP9-6A8MVA2 160 aa8.72□□□□□ -1.01
CLK2-201ENST00000355560 MT1MQ8N339 61 aa8.68□□□□□ -1.02
CLK2-201ENST00000355560 KRTAP5-9P26371 169 aa8.64□□□□□ -1.03
CLK2-201ENST00000355560 LCE5AQ5TCM9 118 aa8.63□□□□□ -1.03
CLK2-201ENST00000355560 KRTAP4-3Q9BYR4 195 aa8.6□□□□□ -1.03
CLK2-201ENST00000355560 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
CLK2-201ENST00000355560 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.48□□□□□ -1.05
CLK2-201ENST00000355560 MDN1Q9NU22 5596 aa8.45□□□□□ -1.06
CLK2-201ENST00000355560 LCE1AQ5T7P2 110 aa8.44□□□□□ -1.06
CLK2-201ENST00000355560 LOC100996750A0A140TA64 210 aa8.38□□□□□ -1.07
CLK2-201ENST00000355560 SPRR2EP22531 72 aa8.35□□□□□ -1.07
CLK2-201ENST00000355560 SPRR2BP35325 72 aa8.35□□□□□ -1.07
CLK2-201ENST00000355560 SPRR2AP35326 72 aa8.35□□□□□ -1.07
CLK2-201ENST00000355560 KRTAP6-3Q3LI67 103 aa8.33□□□□□ -1.08
CLK2-201ENST00000355560 DSTQ03001 7570 aaKnown RBP8.32□□□□□ -1.08
CLK2-201ENST00000355560 A0A0A0MQY5 61 aa8.24□□□□□ -1.09
CLK2-201ENST00000355560 KRTAP2-3P0C7H8 128 aa8.11□□□□□ -1.11
CLK2-201ENST00000355560 KRTAP2-4Q9BYR9 128 aa8.11□□□□□ -1.11
CLK2-201ENST00000355560 KRTAP2-1Q9BYU5 128 aa8.11□□□□□ -1.11
CLK2-201ENST00000355560 SPRR2DP22532 72 aa8.02□□□□□ -1.13
CLK2-201ENST00000355560 KRTAP9-7A8MTY7 169 aa7.91□□□□□ -1.14
CLK2-201ENST00000355560 KRTAP5-5Q701N2 237 aaPredicted RBP7.79□□□□□ -1.16
CLK2-201ENST00000355560 NEBP20929 6669 aa7.77□□□□□ -1.17
CLK2-201ENST00000355560 MT1AP04731 61 aa7.7□□□□□ -1.18
CLK2-201ENST00000355560 KRTAP6-1Q3LI64 71 aa7.69□□□□□ -1.18
CLK2-201ENST00000355560 LCE3BQ5TA77 95 aa7.68□□□□□ -1.18
CLK2-201ENST00000355560 INE1O15225 51 aa7.59□□□□□ -1.19
CLK2-201ENST00000355560 SYNE1Q8NF91 8797 aaKnown RBP7.46□□□□□ -1.22
CLK2-201ENST00000355560 KRTAP9-4Q9BYQ2 154 aa7.29□□□□□ -1.24
CLK2-201ENST00000355560 KRTAP5-4Q6L8H1 288 aa7.27□□□□□ -1.25
CLK2-201ENST00000355560 KRTAP4-9Q9BYQ8 210 aa7.21□□□□□ -1.25
CLK2-201ENST00000355560 KRTAP12-4P60329 112 aa7.15□□□□□ -1.27
CLK2-201ENST00000355560 KRTAP2-2Q9BYT5 123 aa7.09□□□□□ -1.27
CLK2-201ENST00000355560 LCE4AQ5TA78 99 aa7.05□□□□□ -1.28
CLK2-201ENST00000355560 KRTAP6-2Q3LI66 62 aa7.03□□□□□ -1.28
CLK2-201ENST00000355560 KRTAP20-1Q3LI63 56 aa7.02□□□□□ -1.29
CLK2-201ENST00000355560 MT4P47944 62 aa7.01□□□□□ -1.29
CLK2-201ENST00000355560 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
CLK2-201ENST00000355560 MT3P25713 68 aa6.96□□□□□ -1.3
CLK2-201ENST00000355560 LCE3DQ9BYE3 92 aa6.92□□□□□ -1.3
CLK2-201ENST00000355560 KRTAP20-2Q3LI61 65 aa6.83□□□□□ -1.32
CLK2-201ENST00000355560 LCE1DQ5T752 114 aa6.8□□□□□ -1.32
CLK2-201ENST00000355560 HMCN1Q96RW7 5635 aa6.76□□□□□ -1.33
CLK2-201ENST00000355560 LCE3EQ5T5B0 92 aa6.75□□□□□ -1.33
CLK2-201ENST00000355560 KRTAP5-2Q701N4 177 aa6.65□□□□□ -1.35
CLK2-201ENST00000355560 OBSCNQ5VST9 7968 aa6.62□□□□□ -1.35
CLK2-201ENST00000355560 KRTAP5-3Q6L8H2 238 aa6.55□□□□□ -1.36
CLK2-201ENST00000355560 PRM1P04553 51 aa6.06□□□□□ -1.44
CLK2-201ENST00000355560 LCE1EQ5T753 118 aa5.94□□□□□ -1.46
CLK2-201ENST00000355560 KRTAP4-11Q9BYQ6 195 aa5.85□□□□□ -1.47
CLK2-201ENST00000355560 AHNAK2Q8IVF2 5795 aa5.77□□□□□ -1.49
CLK2-201ENST00000355560 KRTAP5-1Q6L8H4 278 aa5.74□□□□□ -1.49
CLK2-201ENST00000355560 LCE1BQ5T7P3 118 aa5.68□□□□□ -1.5
CLK2-201ENST00000355560 MUC5ACP98088 5654 aa5.68□□□□□ -1.5
CLK2-201ENST00000355560 KRTAP5-10Q6L8G5 202 aa5.64□□□□□ -1.51
CLK2-201ENST00000355560 KRTAP5-8O75690 187 aa5.62□□□□□ -1.51
CLK2-201ENST00000355560 KRTAP4-2Q9BYR5 136 aa5.59□□□□□ -1.52
CLK2-201ENST00000355560 LCE1CQ5T751 118 aa5.56□□□□□ -1.52
CLK2-201ENST00000355560 KRTAP5-7Q6L8G8 165 aa5.44□□□□□ -1.54
CLK2-201ENST00000355560 KRTAP9-9Q9BYP9 154 aa5.23□□□□□ -1.57
CLK2-201ENST00000355560 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.21□□□□□ -1.57
CLK2-201ENST00000355560 GPR98Q8WXG9 6306 aa5.06□□□□□ -1.6
CLK2-201ENST00000355560 KRTAP4-12Q9BQ66 201 aa5.02□□□□□ -1.61
CLK2-201ENST00000355560 KRTAP21-2Q3LI59 83 aa5.01□□□□□ -1.61
CLK2-201ENST00000355560 KRTAP5-11Q6L8G4 156 aa4.88□□□□□ -1.63
CLK2-201ENST00000355560 MUC5BQ9HC84 5762 aaPredicted RBP4.86□□□□□ -1.63
CLK2-201ENST00000355560 KRTAP4-4Q9BYR3 166 aa4.51□□□□□ -1.69
CLK2-201ENST00000355560 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
CLK2-201ENST00000355560 PHGR1C9JFL3 82 aa4.21□□□□□ -1.74
CLK2-201ENST00000355560 AHNAKQ09666 5890 aaKnown RBP4.17□□□□□ -1.74
CLK2-201ENST00000355560 MUC19Q7Z5P9 8384 aa3.92□□□□□ -1.78
CLK2-201ENST00000355560 KRTAP21-1Q3LI58 79 aa3.71□□□□□ -1.82
CLK2-201ENST00000355560 MUC16Q8WXI7 14507 aa2.71□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 63.7 ms