RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 KRTAP9-7A8MTY7 169 aa5.51□□□□□ -1.53
CTSA-202ENST00000354880 KRTAP19-3Q7Z4W3 81 aa5.5□□□□□ -1.53
CTSA-202ENST00000354880 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
CTSA-202ENST00000354880 MT1GP13640 62 aa5.44□□□□□ -1.54
CTSA-202ENST00000354880 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
CTSA-202ENST00000354880 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
CTSA-202ENST00000354880 H3BS24 57 aa5.42□□□□□ -1.54
CTSA-202ENST00000354880 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
CTSA-202ENST00000354880 SPRR2EP22531 72 aa5.4□□□□□ -1.54
CTSA-202ENST00000354880 SPRR2BP35325 72 aa5.4□□□□□ -1.54
CTSA-202ENST00000354880 SPRR2AP35326 72 aa5.4□□□□□ -1.54
CTSA-202ENST00000354880 MT1MQ8N339 61 aa5.37□□□□□ -1.55
CTSA-202ENST00000354880 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
CTSA-202ENST00000354880 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
CTSA-202ENST00000354880 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
CTSA-202ENST00000354880 NEBP20929 6669 aa5.22□□□□□ -1.57
CTSA-202ENST00000354880 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.57
CTSA-202ENST00000354880 SPRR2DP22532 72 aa5.21□□□□□ -1.58
CTSA-202ENST00000354880 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
CTSA-202ENST00000354880 LUZP6Q538Z0 58 aa5.1□□□□□ -1.59
CTSA-202ENST00000354880 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
CTSA-202ENST00000354880 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
CTSA-202ENST00000354880 NDUFAF8A1L188 74 aa4.95□□□□□ -1.62
CTSA-202ENST00000354880 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.63
CTSA-202ENST00000354880 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.63
CTSA-202ENST00000354880 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
CTSA-202ENST00000354880 KRTAP5-5Q701N2 237 aaPredicted RBP4.85□□□□□ -1.63
CTSA-202ENST00000354880 KRTAP2-2Q9BYT5 123 aa4.79□□□□□ -1.64
CTSA-202ENST00000354880 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
CTSA-202ENST00000354880 MT1AP04731 61 aa4.72□□□□□ -1.65
CTSA-202ENST00000354880 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
CTSA-202ENST00000354880 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
CTSA-202ENST00000354880 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.67
CTSA-202ENST00000354880 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
CTSA-202ENST00000354880 A0A0A0MQY5 61 aa4.6□□□□□ -1.67
CTSA-202ENST00000354880 KRTAP12-4P60329 112 aa4.54□□□□□ -1.68
CTSA-202ENST00000354880 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
CTSA-202ENST00000354880 MT4P47944 62 aa4.52□□□□□ -1.69
CTSA-202ENST00000354880 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
CTSA-202ENST00000354880 KRTAP4-6Q9BYQ5 205 aa4.47□□□□□ -1.69
CTSA-202ENST00000354880 LCE1DQ5T752 114 aa4.46□□□□□ -1.69
CTSA-202ENST00000354880 HMCN1Q96RW7 5635 aa4.46□□□□□ -1.7
CTSA-202ENST00000354880 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
CTSA-202ENST00000354880 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
CTSA-202ENST00000354880 MT3P25713 68 aa4.3□□□□□ -1.72
CTSA-202ENST00000354880 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
CTSA-202ENST00000354880 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
CTSA-202ENST00000354880 INE1O15225 51 aa4.18□□□□□ -1.74
CTSA-202ENST00000354880 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
CTSA-202ENST00000354880 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
CTSA-202ENST00000354880 AHNAK2Q8IVF2 5795 aa3.98□□□□□ -1.77
CTSA-202ENST00000354880 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
CTSA-202ENST00000354880 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
CTSA-202ENST00000354880 KRTAP5-10Q6L8G5 202 aa3.77□□□□□ -1.81
CTSA-202ENST00000354880 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
CTSA-202ENST00000354880 KRTAP5-8O75690 187 aa3.68□□□□□ -1.82
CTSA-202ENST00000354880 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
CTSA-202ENST00000354880 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
CTSA-202ENST00000354880 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
CTSA-202ENST00000354880 KRTAP5-7Q6L8G8 165 aa3.54□□□□□ -1.84
CTSA-202ENST00000354880 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
CTSA-202ENST00000354880 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
CTSA-202ENST00000354880 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
CTSA-202ENST00000354880 PRM1P04553 51 aa3.38□□□□□ -1.87
CTSA-202ENST00000354880 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
CTSA-202ENST00000354880 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
CTSA-202ENST00000354880 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
CTSA-202ENST00000354880 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
CTSA-202ENST00000354880 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
CTSA-202ENST00000354880 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
CTSA-202ENST00000354880 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
CTSA-202ENST00000354880 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
CTSA-202ENST00000354880 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
CTSA-202ENST00000354880 PHGR1C9JFL3 82 aa2.65□□□□□ -1.98
CTSA-202ENST00000354880 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
CTSA-202ENST00000354880 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
CTSA-202ENST00000354880 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms