RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 KMT2DO14686 5537 aa3.95□□□□□ -1.78
SND1-201ENST00000354725 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
SND1-201ENST00000354725 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
SND1-201ENST00000354725 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
SND1-201ENST00000354725 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
SND1-201ENST00000354725 MUC12Q9UKN1 5478 aa3.84□□□□□ -1.79
SND1-201ENST00000354725 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
SND1-201ENST00000354725 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
SND1-201ENST00000354725 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.79
SND1-201ENST00000354725 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.8
SND1-201ENST00000354725 MDN1Q9NU22 5596 aa3.79□□□□□ -1.8
SND1-201ENST00000354725 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.81
SND1-201ENST00000354725 KRTAP4-8Q9BYQ9 185 aa3.78□□□□□ -1.81
SND1-201ENST00000354725 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
SND1-201ENST00000354725 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
SND1-201ENST00000354725 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
SND1-201ENST00000354725 NEBP20929 6669 aa3.76□□□□□ -1.81
SND1-201ENST00000354725 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
SND1-201ENST00000354725 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
SND1-201ENST00000354725 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
SND1-201ENST00000354725 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
SND1-201ENST00000354725 MUC19Q7Z5P9 8384 aa3.66□□□□□ -1.82
SND1-201ENST00000354725 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
SND1-201ENST00000354725 MT1LQ93083 61 aa3.61□□□□□ -1.83
SND1-201ENST00000354725 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
SND1-201ENST00000354725 MT1EP04732 61 aa3.6□□□□□ -1.83
SND1-201ENST00000354725 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
SND1-201ENST00000354725 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
SND1-201ENST00000354725 KRTAP4-7Q9BYR0 210 aa3.57□□□□□ -1.84
SND1-201ENST00000354725 SPRR2EP22531 72 aa3.51□□□□□ -1.85
SND1-201ENST00000354725 SPRR2BP35325 72 aa3.51□□□□□ -1.85
SND1-201ENST00000354725 SPRR2AP35326 72 aa3.51□□□□□ -1.85
SND1-201ENST00000354725 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
SND1-201ENST00000354725 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.85
SND1-201ENST00000354725 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.86
SND1-201ENST00000354725 SPRR2DP22532 72 aa3.39□□□□□ -1.87
SND1-201ENST00000354725 MT1GP13640 62 aa3.39□□□□□ -1.87
SND1-201ENST00000354725 MT1MQ8N339 61 aa3.37□□□□□ -1.87
SND1-201ENST00000354725 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
SND1-201ENST00000354725 LOC100996750A0A140TA64 210 aa3.33□□□□□ -1.88
SND1-201ENST00000354725 PRM1P04553 51 aa3.32□□□□□ -1.88
SND1-201ENST00000354725 LCE3BQ5TA77 95 aa3.32□□□□□ -1.88
SND1-201ENST00000354725 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
SND1-201ENST00000354725 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
SND1-201ENST00000354725 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
SND1-201ENST00000354725 MT1AP04731 61 aa3.14□□□□□ -1.91
SND1-201ENST00000354725 MT3P25713 68 aa3.13□□□□□ -1.91
SND1-201ENST00000354725 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
SND1-201ENST00000354725 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
SND1-201ENST00000354725 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
SND1-201ENST00000354725 KRTAP4-6Q9BYQ5 205 aa2.98□□□□□ -1.93
SND1-201ENST00000354725 MT4P47944 62 aa2.93□□□□□ -1.94
SND1-201ENST00000354725 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
SND1-201ENST00000354725 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
SND1-201ENST00000354725 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
SND1-201ENST00000354725 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
SND1-201ENST00000354725 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
SND1-201ENST00000354725 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.96
SND1-201ENST00000354725 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
SND1-201ENST00000354725 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
SND1-201ENST00000354725 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
SND1-201ENST00000354725 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
SND1-201ENST00000354725 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
SND1-201ENST00000354725 KRTAP5-8O75690 187 aa2.56□□□□□ -2
SND1-201ENST00000354725 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
SND1-201ENST00000354725 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
SND1-201ENST00000354725 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
SND1-201ENST00000354725 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
SND1-201ENST00000354725 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
SND1-201ENST00000354725 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
SND1-201ENST00000354725 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
SND1-201ENST00000354725 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
SND1-201ENST00000354725 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
SND1-201ENST00000354725 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
SND1-201ENST00000354725 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
SND1-201ENST00000354725 KRTAP4-4Q9BYR3 166 aa1.75□□□□□ -2.13
SND1-201ENST00000354725 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 109.1 ms