RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 LCE5AQ5TCM9 118 aa3.63□□□□□ -1.83
RPE-201ENST00000354506 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
RPE-201ENST00000354506 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
RPE-201ENST00000354506 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
RPE-201ENST00000354506 PRO2289Q9P1D8 64 aa3.59□□□□□ -1.83
RPE-201ENST00000354506 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
RPE-201ENST00000354506 INE1O15225 51 aa3.51□□□□□ -1.85
RPE-201ENST00000354506 LCE4AQ5TA78 99 aa3.5□□□□□ -1.85
RPE-201ENST00000354506 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
RPE-201ENST00000354506 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
RPE-201ENST00000354506 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
RPE-201ENST00000354506 FCGBPQ9Y6R7 5405 aaPredicted RBP3.4□□□□□ -1.86
RPE-201ENST00000354506 CRCT1Q9UGL9 99 aa3.38□□□□□ -1.87
RPE-201ENST00000354506 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
RPE-201ENST00000354506 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
RPE-201ENST00000354506 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.87
RPE-201ENST00000354506 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.87
RPE-201ENST00000354506 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.87
RPE-201ENST00000354506 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
RPE-201ENST00000354506 SSPOA2VEC9 5147 aa3.32□□□□□ -1.88
RPE-201ENST00000354506 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
RPE-201ENST00000354506 MT1LQ93083 61 aa3.31□□□□□ -1.88
RPE-201ENST00000354506 MT1EP04732 61 aa3.3□□□□□ -1.88
RPE-201ENST00000354506 KRTAP19-6Q3LI70 58 aa3.22□□□□□ -1.89
RPE-201ENST00000354506 MT1GP13640 62 aa3.2□□□□□ -1.9
RPE-201ENST00000354506 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
RPE-201ENST00000354506 KRTAP5-3Q6L8H2 238 aa3.07□□□□□ -1.92
RPE-201ENST00000354506 MT1MQ8N339 61 aa3.07□□□□□ -1.92
RPE-201ENST00000354506 KRTAP19-3Q7Z4W3 81 aa3.06□□□□□ -1.92
RPE-201ENST00000354506 KRTAP12-4P60329 112 aa3.06□□□□□ -1.92
RPE-201ENST00000354506 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
RPE-201ENST00000354506 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.94
RPE-201ENST00000354506 MDN1Q9NU22 5596 aa2.94□□□□□ -1.94
RPE-201ENST00000354506 LCE1AQ5T7P2 110 aa2.87□□□□□ -1.95
RPE-201ENST00000354506 MT1AP04731 61 aa2.84□□□□□ -1.95
RPE-201ENST00000354506 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
RPE-201ENST00000354506 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
RPE-201ENST00000354506 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
RPE-201ENST00000354506 PRM1P04553 51 aa2.74□□□□□ -1.97
RPE-201ENST00000354506 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
RPE-201ENST00000354506 LCE3EQ5T5B0 92 aa2.67□□□□□ -1.98
RPE-201ENST00000354506 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
RPE-201ENST00000354506 SPRR2EP22531 72 aa2.61□□□□□ -1.99
RPE-201ENST00000354506 SPRR2BP35325 72 aa2.61□□□□□ -1.99
RPE-201ENST00000354506 SPRR2AP35326 72 aa2.61□□□□□ -1.99
RPE-201ENST00000354506 MT3P25713 68 aa2.61□□□□□ -1.99
RPE-201ENST00000354506 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
RPE-201ENST00000354506 LCE1EQ5T753 118 aa2.57□□□□□ -2
RPE-201ENST00000354506 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
RPE-201ENST00000354506 KRTAP2-2Q9BYT5 123 aa2.51□□□□□ -2.01
RPE-201ENST00000354506 SPRR2DP22532 72 aa2.47□□□□□ -2.01
RPE-201ENST00000354506 KRTAP6-3Q3LI67 103 aa2.45□□□□□ -2.02
RPE-201ENST00000354506 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
RPE-201ENST00000354506 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
RPE-201ENST00000354506 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
RPE-201ENST00000354506 MT4P47944 62 aa2.36□□□□□ -2.03
RPE-201ENST00000354506 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
RPE-201ENST00000354506 NEBP20929 6669 aa2.25□□□□□ -2.05
RPE-201ENST00000354506 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
RPE-201ENST00000354506 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
RPE-201ENST00000354506 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
RPE-201ENST00000354506 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
RPE-201ENST00000354506 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
RPE-201ENST00000354506 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
RPE-201ENST00000354506 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
RPE-201ENST00000354506 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
RPE-201ENST00000354506 KRTAP5-10Q6L8G5 202 aa2.01□□□□□ -2.09
RPE-201ENST00000354506 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
RPE-201ENST00000354506 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
RPE-201ENST00000354506 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
RPE-201ENST00000354506 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
RPE-201ENST00000354506 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
RPE-201ENST00000354506 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
RPE-201ENST00000354506 AHNAK2Q8IVF2 5795 aa1.7□□□□□ -2.14
RPE-201ENST00000354506 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
RPE-201ENST00000354506 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
RPE-201ENST00000354506 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 105.8 ms