RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 KRTAP4-3Q9BYR4 195 aa6.29□□□□□ -1.4
APP-203ENST00000354192 KRTAP19-6Q3LI70 58 aa6.26□□□□□ -1.41
APP-203ENST00000354192 LOC100996750A0A140TA64 210 aa6.2□□□□□ -1.42
APP-203ENST00000354192 KRTAP9-2Q9BYQ4 174 aa6.17□□□□□ -1.42
APP-203ENST00000354192 SYNE1Q8NF91 8797 aaKnown RBP6.16□□□□□ -1.42
APP-203ENST00000354192 SPRR2FQ96RM1 72 aa6.14□□□□□ -1.43
APP-203ENST00000354192 MT1GP13640 62 aa6.13□□□□□ -1.43
APP-203ENST00000354192 MDN1Q9NU22 5596 aa6.13□□□□□ -1.43
APP-203ENST00000354192 LCE2DQ5TA82 110 aaPredicted RBP6.09□□□□□ -1.43
APP-203ENST00000354192 OBSCNQ5VST9 7968 aa6.05□□□□□ -1.44
APP-203ENST00000354192 KRTAP19-3Q7Z4W3 81 aa5.96□□□□□ -1.46
APP-203ENST00000354192 INE1O15225 51 aa5.95□□□□□ -1.46
APP-203ENST00000354192 MT1MQ8N339 61 aa5.94□□□□□ -1.46
APP-203ENST00000354192 KRTAP2-3P0C7H8 128 aa5.81□□□□□ -1.48
APP-203ENST00000354192 KRTAP2-4Q9BYR9 128 aa5.81□□□□□ -1.48
APP-203ENST00000354192 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
APP-203ENST00000354192 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
APP-203ENST00000354192 LCE3BQ5TA77 95 aa5.7□□□□□ -1.5
APP-203ENST00000354192 LCE5AQ5TCM9 118 aa5.69□□□□□ -1.5
APP-203ENST00000354192 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.51
APP-203ENST00000354192 SPRR2EP22531 72 aa5.58□□□□□ -1.52
APP-203ENST00000354192 SPRR2BP35325 72 aa5.58□□□□□ -1.52
APP-203ENST00000354192 SPRR2AP35326 72 aa5.58□□□□□ -1.52
APP-203ENST00000354192 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
APP-203ENST00000354192 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
APP-203ENST00000354192 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
APP-203ENST00000354192 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.46□□□□□ -1.54
APP-203ENST00000354192 KRTAP6-1Q3LI64 71 aa5.44□□□□□ -1.54
APP-203ENST00000354192 KRTAP5-9P26371 169 aa5.34□□□□□ -1.56
APP-203ENST00000354192 SPRR2DP22532 72 aa5.31□□□□□ -1.56
APP-203ENST00000354192 MT1AP04731 61 aa5.21□□□□□ -1.58
APP-203ENST00000354192 KRTAP6-3Q3LI67 103 aa5.15□□□□□ -1.59
APP-203ENST00000354192 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
APP-203ENST00000354192 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
APP-203ENST00000354192 NEBP20929 6669 aa5.09□□□□□ -1.59
APP-203ENST00000354192 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
APP-203ENST00000354192 LCE3EQ5T5B0 92 aa5□□□□□ -1.61
APP-203ENST00000354192 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
APP-203ENST00000354192 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
APP-203ENST00000354192 MT4P47944 62 aa4.9□□□□□ -1.63
APP-203ENST00000354192 PRM1P04553 51 aa4.81□□□□□ -1.64
APP-203ENST00000354192 MT3P25713 68 aa4.78□□□□□ -1.64
APP-203ENST00000354192 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
APP-203ENST00000354192 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
APP-203ENST00000354192 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
APP-203ENST00000354192 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
APP-203ENST00000354192 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
APP-203ENST00000354192 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
APP-203ENST00000354192 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
APP-203ENST00000354192 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
APP-203ENST00000354192 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
APP-203ENST00000354192 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
APP-203ENST00000354192 MUC5ACP98088 5654 aa4.11□□□□□ -1.75
APP-203ENST00000354192 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
APP-203ENST00000354192 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
APP-203ENST00000354192 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
APP-203ENST00000354192 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
APP-203ENST00000354192 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
APP-203ENST00000354192 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
APP-203ENST00000354192 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
APP-203ENST00000354192 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
APP-203ENST00000354192 KRTAP5-10Q6L8G5 202 aa3.61□□□□□ -1.83
APP-203ENST00000354192 GPR98Q8WXG9 6306 aa3.59□□□□□ -1.84
APP-203ENST00000354192 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
APP-203ENST00000354192 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
APP-203ENST00000354192 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
APP-203ENST00000354192 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
APP-203ENST00000354192 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
APP-203ENST00000354192 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
APP-203ENST00000354192 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
APP-203ENST00000354192 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.91
APP-203ENST00000354192 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
APP-203ENST00000354192 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
APP-203ENST00000354192 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
APP-203ENST00000354192 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
APP-203ENST00000354192 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
APP-203ENST00000354192 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 7.9 ms