RNA–Protein interactions for RNA: ENST00000351193.6

NMD3-201, Transcript of NMD3 ribosome export adaptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NMD3, Length 3,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-201ENST00000351193 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
NMD3-201ENST00000351193 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
NMD3-201ENST00000351193 KRTAP9-6A8MVA2 160 aa2.97□□□□□ -1.93
NMD3-201ENST00000351193 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
NMD3-201ENST00000351193 KRTAP19-7Q3SYF9 63 aa2.85□□□□□ -1.95
NMD3-201ENST00000351193 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.96
NMD3-201ENST00000351193 KRTAP2-3P0C7H8 128 aa2.83□□□□□ -1.96
NMD3-201ENST00000351193 KRTAP2-4Q9BYR9 128 aa2.83□□□□□ -1.96
NMD3-201ENST00000351193 KRTAP2-1Q9BYU5 128 aa2.83□□□□□ -1.96
NMD3-201ENST00000351193 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
NMD3-201ENST00000351193 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
NMD3-201ENST00000351193 KRTAP19-4Q3LI73 84 aa2.79□□□□□ -1.96
NMD3-201ENST00000351193 LCE5AQ5TCM9 118 aa2.79□□□□□ -1.96
NMD3-201ENST00000351193 MT1LQ93083 61 aa2.78□□□□□ -1.96
NMD3-201ENST00000351193 CRCT1Q9UGL9 99 aa2.75□□□□□ -1.97
NMD3-201ENST00000351193 MT1EP04732 61 aa2.75□□□□□ -1.97
NMD3-201ENST00000351193 LCE4AQ5TA78 99 aa2.74□□□□□ -1.97
NMD3-201ENST00000351193 KRTAP4-3Q9BYR4 195 aa2.74□□□□□ -1.97
NMD3-201ENST00000351193 DSTQ03001 7570 aaKnown RBP2.72□□□□□ -1.97
NMD3-201ENST00000351193 MT1GP13640 62 aa2.7□□□□□ -1.98
NMD3-201ENST00000351193 SSPOA2VEC9 5147 aa2.7□□□□□ -1.98
NMD3-201ENST00000351193 KRTAP9-7A8MTY7 169 aa2.69□□□□□ -1.98
NMD3-201ENST00000351193 MUC12Q9UKN1 5478 aa2.69□□□□□ -1.98
NMD3-201ENST00000351193 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
NMD3-201ENST00000351193 KRTAP12-4P60329 112 aa2.64□□□□□ -1.99
NMD3-201ENST00000351193 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
NMD3-201ENST00000351193 MT1MQ8N339 61 aa2.57□□□□□ -2
NMD3-201ENST00000351193 KRTAP19-3Q7Z4W3 81 aa2.54□□□□□ -2
NMD3-201ENST00000351193 KRTAP19-6Q3LI70 58 aa2.51□□□□□ -2.01
NMD3-201ENST00000351193 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
NMD3-201ENST00000351193 SPRR2FQ96RM1 72 aa2.47□□□□□ -2.01
NMD3-201ENST00000351193 SYNE2Q8WXH0 6885 aaKnown RBP2.46□□□□□ -2.02
NMD3-201ENST00000351193 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
NMD3-201ENST00000351193 MACF1Q9UPN3 7388 aaKnown RBP2.39□□□□□ -2.03
NMD3-201ENST00000351193 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
NMD3-201ENST00000351193 PRM1P04553 51 aa2.36□□□□□ -2.03
NMD3-201ENST00000351193 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
NMD3-201ENST00000351193 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
NMD3-201ENST00000351193 MT1AP04731 61 aa2.32□□□□□ -2.04
NMD3-201ENST00000351193 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
NMD3-201ENST00000351193 KRTAP6-3Q3LI67 103 aa2.27□□□□□ -2.05
NMD3-201ENST00000351193 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
NMD3-201ENST00000351193 LCE1AQ5T7P2 110 aa2.19□□□□□ -2.06
NMD3-201ENST00000351193 SPRR2EP22531 72 aa2.17□□□□□ -2.06
NMD3-201ENST00000351193 SPRR2BP35325 72 aa2.17□□□□□ -2.06
NMD3-201ENST00000351193 SPRR2AP35326 72 aa2.17□□□□□ -2.06
NMD3-201ENST00000351193 NEBP20929 6669 aa2.17□□□□□ -2.06
NMD3-201ENST00000351193 KRTAP5-9P26371 169 aa2.16□□□□□ -2.06
NMD3-201ENST00000351193 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
NMD3-201ENST00000351193 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
NMD3-201ENST00000351193 KRTAP20-1Q3LI63 56 aa2.09□□□□□ -2.07
NMD3-201ENST00000351193 MT3P25713 68 aa2.07□□□□□ -2.08
NMD3-201ENST00000351193 SPRR2DP22532 72 aa2.06□□□□□ -2.08
NMD3-201ENST00000351193 KRTAP2-2Q9BYT5 123 aa2.05□□□□□ -2.08
NMD3-201ENST00000351193 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
NMD3-201ENST00000351193 MT4P47944 62 aa1.91□□□□□ -2.1
NMD3-201ENST00000351193 GPR98Q8WXG9 6306 aa1.89□□□□□ -2.11
NMD3-201ENST00000351193 LCE1EQ5T753 118 aa1.85□□□□□ -2.11
NMD3-201ENST00000351193 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
NMD3-201ENST00000351193 KRTAP5-4Q6L8H1 288 aa1.81□□□□□ -2.12
NMD3-201ENST00000351193 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
NMD3-201ENST00000351193 LCE1BQ5T7P3 118 aa1.77□□□□□ -2.13
NMD3-201ENST00000351193 KRTAP5-1Q6L8H4 278 aa1.75□□□□□ -2.13
NMD3-201ENST00000351193 KRTAP5-2Q701N4 177 aa1.72□□□□□ -2.13
NMD3-201ENST00000351193 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
NMD3-201ENST00000351193 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
NMD3-201ENST00000351193 AHNAK2Q8IVF2 5795 aa1.65□□□□□ -2.15
NMD3-201ENST00000351193 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
NMD3-201ENST00000351193 KRTAP5-8O75690 187 aa1.59□□□□□ -2.15
NMD3-201ENST00000351193 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
NMD3-201ENST00000351193 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
NMD3-201ENST00000351193 LCE1FQ5T754 118 aa1.53□□□□□ -2.16
NMD3-201ENST00000351193 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
NMD3-201ENST00000351193 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
NMD3-201ENST00000351193 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
NMD3-201ENST00000351193 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
NMD3-201ENST00000351193 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 94 ms