RNA–Protein interactions for RNA: ENST00000349157.10

PUF60-202, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PUF60, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-202ENST00000349157 KRTAP6-3Q3LI67 103 aa6.94□□□□□ -1.3
PUF60-202ENST00000349157 KMT2DO14686 5537 aa6.93□□□□□ -1.3
PUF60-202ENST00000349157 MT1LQ93083 61 aa6.9□□□□□ -1.3
PUF60-202ENST00000349157 NEBP20929 6669 aa6.76□□□□□ -1.33
PUF60-202ENST00000349157 A0A0A0MQY5 61 aa6.72□□□□□ -1.33
PUF60-202ENST00000349157 MT1GP13640 62 aa6.7□□□□□ -1.34
PUF60-202ENST00000349157 KRTAP20-1Q3LI63 56 aa6.69□□□□□ -1.34
PUF60-202ENST00000349157 KRTAP19-3Q7Z4W3 81 aa6.69□□□□□ -1.34
PUF60-202ENST00000349157 SPRR2FQ96RM1 72 aa6.59□□□□□ -1.35
PUF60-202ENST00000349157 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
PUF60-202ENST00000349157 MT1MQ8N339 61 aa6.55□□□□□ -1.36
PUF60-202ENST00000349157 MUC12Q9UKN1 5478 aa6.55□□□□□ -1.36
PUF60-202ENST00000349157 KRTAP9-6A8MVA2 160 aa6.55□□□□□ -1.36
PUF60-202ENST00000349157 LCE5AQ5TCM9 118 aa6.51□□□□□ -1.37
PUF60-202ENST00000349157 KRTAP5-9P26371 169 aa6.48□□□□□ -1.37
PUF60-202ENST00000349157 KRTAP2-3P0C7H8 128 aa6.39□□□□□ -1.39
PUF60-202ENST00000349157 KRTAP2-4Q9BYR9 128 aa6.39□□□□□ -1.39
PUF60-202ENST00000349157 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
PUF60-202ENST00000349157 KRTAP4-3Q9BYR4 195 aa6.31□□□□□ -1.4
PUF60-202ENST00000349157 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
PUF60-202ENST00000349157 LCE1AQ5T7P2 110 aa6.27□□□□□ -1.41
PUF60-202ENST00000349157 INE1O15225 51 aa6.26□□□□□ -1.41
PUF60-202ENST00000349157 SPRR2EP22531 72 aa6.18□□□□□ -1.42
PUF60-202ENST00000349157 SPRR2BP35325 72 aa6.18□□□□□ -1.42
PUF60-202ENST00000349157 SPRR2AP35326 72 aa6.18□□□□□ -1.42
PUF60-202ENST00000349157 LOC100996750A0A140TA64 210 aa6.17□□□□□ -1.42
PUF60-202ENST00000349157 KRTAP2-2Q9BYT5 123 aa6.15□□□□□ -1.43
PUF60-202ENST00000349157 SPRR2DP22532 72 aa5.96□□□□□ -1.46
PUF60-202ENST00000349157 GPR98Q8WXG9 6306 aa5.93□□□□□ -1.46
PUF60-202ENST00000349157 MT1AP04731 61 aa5.91□□□□□ -1.46
PUF60-202ENST00000349157 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
PUF60-202ENST00000349157 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
PUF60-202ENST00000349157 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
PUF60-202ENST00000349157 LCE3BQ5TA77 95 aa5.76□□□□□ -1.49
PUF60-202ENST00000349157 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
PUF60-202ENST00000349157 KRTAP5-4Q6L8H1 288 aa5.5□□□□□ -1.53
PUF60-202ENST00000349157 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
PUF60-202ENST00000349157 KRTAP12-4P60329 112 aa5.46□□□□□ -1.53
PUF60-202ENST00000349157 SYNE1Q8NF91 8797 aaKnown RBP5.42□□□□□ -1.54
PUF60-202ENST00000349157 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
PUF60-202ENST00000349157 MT3P25713 68 aa5.37□□□□□ -1.55
PUF60-202ENST00000349157 LCE3DQ9BYE3 92 aa5.36□□□□□ -1.55
PUF60-202ENST00000349157 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
PUF60-202ENST00000349157 KRTAP5-10Q6L8G5 202 aa5.28□□□□□ -1.56
PUF60-202ENST00000349157 LCE3EQ5T5B0 92 aa5.27□□□□□ -1.57
PUF60-202ENST00000349157 HMCN1Q96RW7 5635 aa5.26□□□□□ -1.57
PUF60-202ENST00000349157 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
PUF60-202ENST00000349157 AHNAK2Q8IVF2 5795 aa5.22□□□□□ -1.57
PUF60-202ENST00000349157 KRTAP5-7Q6L8G8 165 aa5.18□□□□□ -1.58
PUF60-202ENST00000349157 MT4P47944 62 aa5.14□□□□□ -1.59
PUF60-202ENST00000349157 KRTAP20-2Q3LI61 65 aa5.09□□□□□ -1.59
PUF60-202ENST00000349157 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
PUF60-202ENST00000349157 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
PUF60-202ENST00000349157 KRTAP5-3Q6L8H2 238 aa5.01□□□□□ -1.61
PUF60-202ENST00000349157 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
PUF60-202ENST00000349157 PRM1P04553 51 aa4.67□□□□□ -1.66
PUF60-202ENST00000349157 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
PUF60-202ENST00000349157 AHNAKQ09666 5890 aaKnown RBP4.53□□□□□ -1.68
PUF60-202ENST00000349157 MUC5ACP98088 5654 aa4.47□□□□□ -1.69
PUF60-202ENST00000349157 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.69
PUF60-202ENST00000349157 MUC5BQ9HC84 5762 aaPredicted RBP4.4□□□□□ -1.71
PUF60-202ENST00000349157 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
PUF60-202ENST00000349157 LCE1CQ5T751 118 aa4.28□□□□□ -1.72
PUF60-202ENST00000349157 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
PUF60-202ENST00000349157 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
PUF60-202ENST00000349157 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.74
PUF60-202ENST00000349157 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
PUF60-202ENST00000349157 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
PUF60-202ENST00000349157 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
PUF60-202ENST00000349157 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
PUF60-202ENST00000349157 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
PUF60-202ENST00000349157 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
PUF60-202ENST00000349157 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
PUF60-202ENST00000349157 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
PUF60-202ENST00000349157 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
PUF60-202ENST00000349157 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
PUF60-202ENST00000349157 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms