RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 CCDC179H3BU77 68 aa4.79□□□□□ -1.64
CLCC1-202ENST00000348264 MT1GP13640 62 aa4.78□□□□□ -1.64
CLCC1-202ENST00000348264 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
CLCC1-202ENST00000348264 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
CLCC1-202ENST00000348264 MT1LQ93083 61 aa4.74□□□□□ -1.65
CLCC1-202ENST00000348264 PP632Q6XCG6 107 aa4.73□□□□□ -1.65
CLCC1-202ENST00000348264 MT1MQ8N339 61 aa4.73□□□□□ -1.65
CLCC1-202ENST00000348264 ATP5EP56381 51 aaPredicted RBP4.71□□□□□ -1.66
CLCC1-202ENST00000348264 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
CLCC1-202ENST00000348264 TNP1P09430 55 aa4.7□□□□□ -1.66
CLCC1-202ENST00000348264 PRR15LQ9BU68 103 aa4.7□□□□□ -1.66
CLCC1-202ENST00000348264 GPR98Q8WXG9 6306 aa4.68□□□□□ -1.66
CLCC1-202ENST00000348264 LINC01558Q9Y6Z2 57 aa4.67□□□□□ -1.66
CLCC1-202ENST00000348264 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
CLCC1-202ENST00000348264 HMCN1Q96RW7 5635 aa4.62□□□□□ -1.67
CLCC1-202ENST00000348264 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
CLCC1-202ENST00000348264 TMEM258P61165 79 aa4.59□□□□□ -1.67
CLCC1-202ENST00000348264 RPS28P62857 69 aaKnown RBP4.59□□□□□ -1.67
CLCC1-202ENST00000348264 MT4P47944 62 aa4.58□□□□□ -1.68
CLCC1-202ENST00000348264 UQCR11O14957 56 aa4.55□□□□□ -1.68
CLCC1-202ENST00000348264 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
CLCC1-202ENST00000348264 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
CLCC1-202ENST00000348264 AHNAK2Q8IVF2 5795 aa4.5□□□□□ -1.69
CLCC1-202ENST00000348264 MIR22HGQ0VDD5 57 aa4.45□□□□□ -1.7
CLCC1-202ENST00000348264 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
CLCC1-202ENST00000348264 PSPHP1O15172 72 aa4.36□□□□□ -1.71
CLCC1-202ENST00000348264 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
CLCC1-202ENST00000348264 K7ERS5 55 aa4.34□□□□□ -1.71
CLCC1-202ENST00000348264 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
CLCC1-202ENST00000348264 V9GYY9 64 aa4.31□□□□□ -1.72
CLCC1-202ENST00000348264 Q1T7F1 81 aa4.3□□□□□ -1.72
CLCC1-202ENST00000348264 KRTAP20-2Q3LI61 65 aa4.28□□□□□ -1.72
CLCC1-202ENST00000348264 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
CLCC1-202ENST00000348264 PRO0628Q9UI54 55 aa4.23□□□□□ -1.73
CLCC1-202ENST00000348264 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
CLCC1-202ENST00000348264 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
CLCC1-202ENST00000348264 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
CLCC1-202ENST00000348264 A6NED7 52 aa4.19□□□□□ -1.74
CLCC1-202ENST00000348264 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
CLCC1-202ENST00000348264 KRTAP5-7Q6L8G8 165 aa4.16□□□□□ -1.74
CLCC1-202ENST00000348264 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
CLCC1-202ENST00000348264 CDC42SE1Q9NRR8 79 aa4.13□□□□□ -1.75
CLCC1-202ENST00000348264 ROMO1P60602 79 aa4.07□□□□□ -1.76
CLCC1-202ENST00000348264 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
CLCC1-202ENST00000348264 MT1AP04731 61 aa4.03□□□□□ -1.76
CLCC1-202ENST00000348264 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
CLCC1-202ENST00000348264 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
CLCC1-202ENST00000348264 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
CLCC1-202ENST00000348264 PMAIP1Q13794 54 aa3.96□□□□□ -1.78
CLCC1-202ENST00000348264 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
CLCC1-202ENST00000348264 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
CLCC1-202ENST00000348264 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
CLCC1-202ENST00000348264 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
CLCC1-202ENST00000348264 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
CLCC1-202ENST00000348264 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
CLCC1-202ENST00000348264 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
CLCC1-202ENST00000348264 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
CLCC1-202ENST00000348264 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
CLCC1-202ENST00000348264 MT3P25713 68 aa3.66□□□□□ -1.82
CLCC1-202ENST00000348264 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
CLCC1-202ENST00000348264 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
CLCC1-202ENST00000348264 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
CLCC1-202ENST00000348264 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
CLCC1-202ENST00000348264 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
CLCC1-202ENST00000348264 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
CLCC1-202ENST00000348264 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
CLCC1-202ENST00000348264 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
CLCC1-202ENST00000348264 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
CLCC1-202ENST00000348264 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
CLCC1-202ENST00000348264 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
CLCC1-202ENST00000348264 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
CLCC1-202ENST00000348264 INE1O15225 51 aa2.62□□□□□ -1.99
CLCC1-202ENST00000348264 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
CLCC1-202ENST00000348264 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
CLCC1-202ENST00000348264 PRM1P04553 51 aa2.09□□□□□ -2.07
CLCC1-202ENST00000348264 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
CLCC1-202ENST00000348264 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms