RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 KRTAP9-6A8MVA2 160 aa4.85□□□□□ -1.63
CDK5RAP1-202ENST00000346416 CRCT1Q9UGL9 99 aa4.82□□□□□ -1.64
CDK5RAP1-202ENST00000346416 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
CDK5RAP1-202ENST00000346416 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
CDK5RAP1-202ENST00000346416 MT1GP13640 62 aa4.76□□□□□ -1.65
CDK5RAP1-202ENST00000346416 MT1MQ8N339 61 aa4.73□□□□□ -1.65
CDK5RAP1-202ENST00000346416 SYNE2Q8WXH0 6885 aaKnown RBP4.72□□□□□ -1.65
CDK5RAP1-202ENST00000346416 KRTAP9-6A0A140TA67 174 aa4.72□□□□□ -1.65
CDK5RAP1-202ENST00000346416 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
CDK5RAP1-202ENST00000346416 INE1O15225 51 aa4.71□□□□□ -1.66
CDK5RAP1-202ENST00000346416 LCE5AQ5TCM9 118 aa4.68□□□□□ -1.66
CDK5RAP1-202ENST00000346416 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
CDK5RAP1-202ENST00000346416 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
CDK5RAP1-202ENST00000346416 MDN1Q9NU22 5596 aa4.6□□□□□ -1.67
CDK5RAP1-202ENST00000346416 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
CDK5RAP1-202ENST00000346416 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
CDK5RAP1-202ENST00000346416 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
CDK5RAP1-202ENST00000346416 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
CDK5RAP1-202ENST00000346416 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
CDK5RAP1-202ENST00000346416 SPRR2EP22531 72 aa4.45□□□□□ -1.7
CDK5RAP1-202ENST00000346416 SPRR2BP35325 72 aa4.45□□□□□ -1.7
CDK5RAP1-202ENST00000346416 SPRR2AP35326 72 aa4.45□□□□□ -1.7
CDK5RAP1-202ENST00000346416 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
CDK5RAP1-202ENST00000346416 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
CDK5RAP1-202ENST00000346416 SPRR2DP22532 72 aa4.28□□□□□ -1.72
CDK5RAP1-202ENST00000346416 KRTAP9-7A8MTY7 169 aa4.26□□□□□ -1.73
CDK5RAP1-202ENST00000346416 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
CDK5RAP1-202ENST00000346416 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
CDK5RAP1-202ENST00000346416 MT1AP04731 61 aa4.21□□□□□ -1.74
CDK5RAP1-202ENST00000346416 LCE3BQ5TA77 95 aa4.17□□□□□ -1.74
CDK5RAP1-202ENST00000346416 NEBP20929 6669 aa4.1□□□□□ -1.75
CDK5RAP1-202ENST00000346416 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
CDK5RAP1-202ENST00000346416 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
CDK5RAP1-202ENST00000346416 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
CDK5RAP1-202ENST00000346416 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
CDK5RAP1-202ENST00000346416 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
CDK5RAP1-202ENST00000346416 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
CDK5RAP1-202ENST00000346416 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
CDK5RAP1-202ENST00000346416 MT3P25713 68 aa3.8□□□□□ -1.8
CDK5RAP1-202ENST00000346416 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
CDK5RAP1-202ENST00000346416 MT4P47944 62 aa3.75□□□□□ -1.81
CDK5RAP1-202ENST00000346416 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
CDK5RAP1-202ENST00000346416 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
CDK5RAP1-202ENST00000346416 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
CDK5RAP1-202ENST00000346416 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
CDK5RAP1-202ENST00000346416 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
CDK5RAP1-202ENST00000346416 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
CDK5RAP1-202ENST00000346416 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
CDK5RAP1-202ENST00000346416 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
CDK5RAP1-202ENST00000346416 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
CDK5RAP1-202ENST00000346416 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
CDK5RAP1-202ENST00000346416 PRM1P04553 51 aa3.48□□□□□ -1.85
CDK5RAP1-202ENST00000346416 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
CDK5RAP1-202ENST00000346416 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
CDK5RAP1-202ENST00000346416 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
CDK5RAP1-202ENST00000346416 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
CDK5RAP1-202ENST00000346416 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
CDK5RAP1-202ENST00000346416 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
CDK5RAP1-202ENST00000346416 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
CDK5RAP1-202ENST00000346416 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
CDK5RAP1-202ENST00000346416 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
CDK5RAP1-202ENST00000346416 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
CDK5RAP1-202ENST00000346416 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
CDK5RAP1-202ENST00000346416 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
CDK5RAP1-202ENST00000346416 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
CDK5RAP1-202ENST00000346416 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
CDK5RAP1-202ENST00000346416 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
CDK5RAP1-202ENST00000346416 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
CDK5RAP1-202ENST00000346416 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
CDK5RAP1-202ENST00000346416 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
CDK5RAP1-202ENST00000346416 KRTAP4-12Q9BQ66 201 aa2.5□□□□□ -2.01
CDK5RAP1-202ENST00000346416 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
CDK5RAP1-202ENST00000346416 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
CDK5RAP1-202ENST00000346416 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
CDK5RAP1-202ENST00000346416 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
CDK5RAP1-202ENST00000346416 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
CDK5RAP1-202ENST00000346416 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 107.4 ms