RNA–Protein interactions for RNA: ENST00000346329.7

CTTN-202, Transcript of cortactin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-202ENST00000346329 SPRR2FQ96RM1 72 aa5.45□□□□□ -1.54
CTTN-202ENST00000346329 KRTAP19-7Q3SYF9 63 aa5.42□□□□□ -1.54
CTTN-202ENST00000346329 KRTAP9-6A0A140TA67 174 aa5.35□□□□□ -1.55
CTTN-202ENST00000346329 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
CTTN-202ENST00000346329 MT1EP04732 61 aa5.28□□□□□ -1.56
CTTN-202ENST00000346329 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
CTTN-202ENST00000346329 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
CTTN-202ENST00000346329 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.57
CTTN-202ENST00000346329 MT1LQ93083 61 aa5.21□□□□□ -1.57
CTTN-202ENST00000346329 MT1GP13640 62 aa5.19□□□□□ -1.58
CTTN-202ENST00000346329 SPRR2EP22531 72 aa5.03□□□□□ -1.6
CTTN-202ENST00000346329 SPRR2BP35325 72 aa5.03□□□□□ -1.6
CTTN-202ENST00000346329 SPRR2AP35326 72 aa5.03□□□□□ -1.6
CTTN-202ENST00000346329 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
CTTN-202ENST00000346329 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
CTTN-202ENST00000346329 MT1MQ8N339 61 aa4.99□□□□□ -1.61
CTTN-202ENST00000346329 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.97□□□□□ -1.61
CTTN-202ENST00000346329 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
CTTN-202ENST00000346329 LCE5AQ5TCM9 118 aa4.83□□□□□ -1.64
CTTN-202ENST00000346329 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
CTTN-202ENST00000346329 SPRR2DP22532 72 aa4.78□□□□□ -1.64
CTTN-202ENST00000346329 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
CTTN-202ENST00000346329 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
CTTN-202ENST00000346329 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
CTTN-202ENST00000346329 KRTAP5-9P26371 169 aa4.65□□□□□ -1.66
CTTN-202ENST00000346329 NEBP20929 6669 aa4.62□□□□□ -1.67
CTTN-202ENST00000346329 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
CTTN-202ENST00000346329 MT4P47944 62 aa4.52□□□□□ -1.69
CTTN-202ENST00000346329 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
CTTN-202ENST00000346329 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
CTTN-202ENST00000346329 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
CTTN-202ENST00000346329 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
CTTN-202ENST00000346329 KRTAP4-6Q9BYQ5 205 aa4.32□□□□□ -1.72
CTTN-202ENST00000346329 HMCN1Q96RW7 5635 aa4.31□□□□□ -1.72
CTTN-202ENST00000346329 KRTAP20-1Q3LI63 56 aa4.27□□□□□ -1.73
CTTN-202ENST00000346329 MT1AP04731 61 aa4.26□□□□□ -1.73
CTTN-202ENST00000346329 KRTAP6-2Q3LI66 62 aa4.25□□□□□ -1.73
CTTN-202ENST00000346329 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
CTTN-202ENST00000346329 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
CTTN-202ENST00000346329 INE1O15225 51 aa4.17□□□□□ -1.74
CTTN-202ENST00000346329 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
CTTN-202ENST00000346329 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
CTTN-202ENST00000346329 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
CTTN-202ENST00000346329 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
CTTN-202ENST00000346329 MT3P25713 68 aa3.91□□□□□ -1.78
CTTN-202ENST00000346329 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
CTTN-202ENST00000346329 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
CTTN-202ENST00000346329 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
CTTN-202ENST00000346329 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
CTTN-202ENST00000346329 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
CTTN-202ENST00000346329 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
CTTN-202ENST00000346329 PRM1P04553 51 aa3.72□□□□□ -1.81
CTTN-202ENST00000346329 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
CTTN-202ENST00000346329 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
CTTN-202ENST00000346329 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
CTTN-202ENST00000346329 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
CTTN-202ENST00000346329 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
CTTN-202ENST00000346329 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
CTTN-202ENST00000346329 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.87
CTTN-202ENST00000346329 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
CTTN-202ENST00000346329 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
CTTN-202ENST00000346329 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
CTTN-202ENST00000346329 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
CTTN-202ENST00000346329 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
CTTN-202ENST00000346329 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
CTTN-202ENST00000346329 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
CTTN-202ENST00000346329 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
CTTN-202ENST00000346329 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
CTTN-202ENST00000346329 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
CTTN-202ENST00000346329 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
CTTN-202ENST00000346329 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
CTTN-202ENST00000346329 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
CTTN-202ENST00000346329 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
CTTN-202ENST00000346329 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
CTTN-202ENST00000346329 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
CTTN-202ENST00000346329 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
CTTN-202ENST00000346329 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 245.2 ms