RNA–Protein interactions for RNA: ENST00000345330.8

NPTN-201, Transcript of neuroplastin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPTN, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-201ENST00000345330 MT1EP04732 61 aa4.92□□□□□ -1.62
NPTN-201ENST00000345330 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.89□□□□□ -1.63
NPTN-201ENST00000345330 MT1LQ93083 61 aa4.87□□□□□ -1.63
NPTN-201ENST00000345330 MUC12Q9UKN1 5478 aa4.85□□□□□ -1.63
NPTN-201ENST00000345330 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.63
NPTN-201ENST00000345330 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
NPTN-201ENST00000345330 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.66
NPTN-201ENST00000345330 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
NPTN-201ENST00000345330 KRTAP4-12Q9BQ66 201 aa4.63□□□□□ -1.67
NPTN-201ENST00000345330 MDN1Q9NU22 5596 aa4.63□□□□□ -1.67
NPTN-201ENST00000345330 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
NPTN-201ENST00000345330 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
NPTN-201ENST00000345330 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
NPTN-201ENST00000345330 MT1MQ8N339 61 aa4.61□□□□□ -1.67
NPTN-201ENST00000345330 KRTAP6-3Q3LI67 103 aa4.61□□□□□ -1.67
NPTN-201ENST00000345330 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
NPTN-201ENST00000345330 MT1GP13640 62 aa4.56□□□□□ -1.68
NPTN-201ENST00000345330 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
NPTN-201ENST00000345330 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
NPTN-201ENST00000345330 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
NPTN-201ENST00000345330 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
NPTN-201ENST00000345330 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
NPTN-201ENST00000345330 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
NPTN-201ENST00000345330 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
NPTN-201ENST00000345330 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
NPTN-201ENST00000345330 NEBP20929 6669 aa4.41□□□□□ -1.7
NPTN-201ENST00000345330 SPRR2EP22531 72 aa4.41□□□□□ -1.7
NPTN-201ENST00000345330 SPRR2BP35325 72 aa4.41□□□□□ -1.7
NPTN-201ENST00000345330 SPRR2AP35326 72 aa4.41□□□□□ -1.7
NPTN-201ENST00000345330 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.71
NPTN-201ENST00000345330 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
NPTN-201ENST00000345330 INE1O15225 51 aa4.24□□□□□ -1.73
NPTN-201ENST00000345330 SPRR2DP22532 72 aa4.24□□□□□ -1.73
NPTN-201ENST00000345330 LCE4AQ5TA78 99 aa4.23□□□□□ -1.73
NPTN-201ENST00000345330 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
NPTN-201ENST00000345330 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.74
NPTN-201ENST00000345330 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
NPTN-201ENST00000345330 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
NPTN-201ENST00000345330 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
NPTN-201ENST00000345330 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.76
NPTN-201ENST00000345330 MT1AP04731 61 aa4.06□□□□□ -1.76
NPTN-201ENST00000345330 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
NPTN-201ENST00000345330 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
NPTN-201ENST00000345330 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
NPTN-201ENST00000345330 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
NPTN-201ENST00000345330 MT4P47944 62 aa3.75□□□□□ -1.81
NPTN-201ENST00000345330 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
NPTN-201ENST00000345330 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
NPTN-201ENST00000345330 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
NPTN-201ENST00000345330 HMCN1Q96RW7 5635 aa3.7□□□□□ -1.82
NPTN-201ENST00000345330 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.82
NPTN-201ENST00000345330 MT3P25713 68 aa3.64□□□□□ -1.83
NPTN-201ENST00000345330 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
NPTN-201ENST00000345330 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
NPTN-201ENST00000345330 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
NPTN-201ENST00000345330 PRM1P04553 51 aa3.41□□□□□ -1.86
NPTN-201ENST00000345330 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
NPTN-201ENST00000345330 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
NPTN-201ENST00000345330 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
NPTN-201ENST00000345330 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
NPTN-201ENST00000345330 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
NPTN-201ENST00000345330 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
NPTN-201ENST00000345330 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
NPTN-201ENST00000345330 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
NPTN-201ENST00000345330 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
NPTN-201ENST00000345330 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
NPTN-201ENST00000345330 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
NPTN-201ENST00000345330 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
NPTN-201ENST00000345330 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
NPTN-201ENST00000345330 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
NPTN-201ENST00000345330 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
NPTN-201ENST00000345330 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
NPTN-201ENST00000345330 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
NPTN-201ENST00000345330 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
NPTN-201ENST00000345330 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
NPTN-201ENST00000345330 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.08
NPTN-201ENST00000345330 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 82.7 ms