RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 KRTAP6-3Q3LI67 103 aa9.09□□□□□ -0.95
TRADD-201ENST00000345057 LCE3CQ5T5A8 94 aa9□□□□□ -0.97
TRADD-201ENST00000345057 MT1LQ93083 61 aa8.95□□□□□ -0.98
TRADD-201ENST00000345057 MUC12Q9UKN1 5478 aa8.87□□□□□ -0.99
TRADD-201ENST00000345057 KRTAP5-9P26371 169 aa8.86□□□□□ -0.99
TRADD-201ENST00000345057 SPRR2FQ96RM1 72 aa8.78□□□□□ -1
TRADD-201ENST00000345057 KRTAP19-3Q7Z4W3 81 aa8.73□□□□□ -1.01
TRADD-201ENST00000345057 NEBP20929 6669 aa8.72□□□□□ -1.01
TRADD-201ENST00000345057 MT1GP13640 62 aa8.7□□□□□ -1.02
TRADD-201ENST00000345057 MDN1Q9NU22 5596 aa8.69□□□□□ -1.02
TRADD-201ENST00000345057 KRTAP4-7Q9BYR0 210 aa8.62□□□□□ -1.03
TRADD-201ENST00000345057 MT1MQ8N339 61 aa8.55□□□□□ -1.04
TRADD-201ENST00000345057 LCE5AQ5TCM9 118 aa8.53□□□□□ -1.04
TRADD-201ENST00000345057 A0A0A0MQY5 61 aa8.5□□□□□ -1.05
TRADD-201ENST00000345057 SPRR2EP22531 72 aa8.49□□□□□ -1.05
TRADD-201ENST00000345057 SPRR2BP35325 72 aa8.49□□□□□ -1.05
TRADD-201ENST00000345057 SPRR2AP35326 72 aa8.49□□□□□ -1.05
TRADD-201ENST00000345057 LCE1AQ5T7P2 110 aa8.44□□□□□ -1.06
TRADD-201ENST00000345057 KRTAP9-6A8MVA2 160 aa8.43□□□□□ -1.06
TRADD-201ENST00000345057 KRTAP4-3Q9BYR4 195 aa8.32□□□□□ -1.08
TRADD-201ENST00000345057 KRTAP20-1Q3LI63 56 aa8.22□□□□□ -1.09
TRADD-201ENST00000345057 SPRR2DP22532 72 aa8.2□□□□□ -1.1
TRADD-201ENST00000345057 KRTAP2-3P0C7H8 128 aa8.11□□□□□ -1.11
TRADD-201ENST00000345057 KRTAP2-4Q9BYR9 128 aa8.11□□□□□ -1.11
TRADD-201ENST00000345057 LOC100996750A0A140TA64 210 aa8.09□□□□□ -1.12
TRADD-201ENST00000345057 KRTAP2-1Q9BYU5 128 aa7.96□□□□□ -1.14
TRADD-201ENST00000345057 LCE3BQ5TA77 95 aa7.94□□□□□ -1.14
TRADD-201ENST00000345057 KRTAP2-2Q9BYT5 123 aa7.89□□□□□ -1.15
TRADD-201ENST00000345057 DSTQ03001 7570 aaKnown RBP7.87□□□□□ -1.15
TRADD-201ENST00000345057 INE1O15225 51 aa7.7□□□□□ -1.18
TRADD-201ENST00000345057 KRTAP5-5Q701N2 237 aaPredicted RBP7.68□□□□□ -1.18
TRADD-201ENST00000345057 MT1AP04731 61 aa7.63□□□□□ -1.19
TRADD-201ENST00000345057 KRTAP6-1Q3LI64 71 aa7.51□□□□□ -1.21
TRADD-201ENST00000345057 KRTAP4-9Q9BYQ8 210 aa7.32□□□□□ -1.24
TRADD-201ENST00000345057 LCE4AQ5TA78 99 aa7.24□□□□□ -1.25
TRADD-201ENST00000345057 KRTAP5-4Q6L8H1 288 aa7.24□□□□□ -1.25
TRADD-201ENST00000345057 KRTAP9-4Q9BYQ2 154 aa7.22□□□□□ -1.25
TRADD-201ENST00000345057 SYNE1Q8NF91 8797 aaKnown RBP7.21□□□□□ -1.25
TRADD-201ENST00000345057 MT4P47944 62 aa7.17□□□□□ -1.26
TRADD-201ENST00000345057 LCE1DQ5T752 114 aa7.17□□□□□ -1.26
TRADD-201ENST00000345057 KRTAP12-4P60329 112 aa7.15□□□□□ -1.26
TRADD-201ENST00000345057 HMCN1Q96RW7 5635 aa7.08□□□□□ -1.28
TRADD-201ENST00000345057 KRTAP4-6Q9BYQ5 205 aa7.02□□□□□ -1.29
TRADD-201ENST00000345057 MT3P25713 68 aa6.93□□□□□ -1.3
TRADD-201ENST00000345057 KRTAP6-2Q3LI66 62 aa6.9□□□□□ -1.31
TRADD-201ENST00000345057 LCE3DQ9BYE3 92 aa6.81□□□□□ -1.32
TRADD-201ENST00000345057 KRTAP20-2Q3LI61 65 aa6.79□□□□□ -1.32
TRADD-201ENST00000345057 LCE3EQ5T5B0 92 aa6.66□□□□□ -1.34
TRADD-201ENST00000345057 GPR98Q8WXG9 6306 aa6.65□□□□□ -1.34
TRADD-201ENST00000345057 AHNAK2Q8IVF2 5795 aa6.64□□□□□ -1.35
TRADD-201ENST00000345057 KRTAP5-2Q701N4 177 aa6.61□□□□□ -1.35
TRADD-201ENST00000345057 KRTAP5-3Q6L8H2 238 aa6.57□□□□□ -1.36
TRADD-201ENST00000345057 KRTAP5-10Q6L8G5 202 aa6.41□□□□□ -1.38
TRADD-201ENST00000345057 OBSCNQ5VST9 7968 aa6.22□□□□□ -1.41
TRADD-201ENST00000345057 KRTAP4-11Q9BYQ6 195 aa6.09□□□□□ -1.43
TRADD-201ENST00000345057 KRTAP5-7Q6L8G8 165 aa6.08□□□□□ -1.44
TRADD-201ENST00000345057 LCE1EQ5T753 118 aa5.98□□□□□ -1.45
TRADD-201ENST00000345057 KRTAP5-8O75690 187 aa5.88□□□□□ -1.47
TRADD-201ENST00000345057 PRM1P04553 51 aa5.87□□□□□ -1.47
TRADD-201ENST00000345057 KRTAP5-1Q6L8H4 278 aa5.66□□□□□ -1.5
TRADD-201ENST00000345057 LCE1CQ5T751 118 aa5.56□□□□□ -1.52
TRADD-201ENST00000345057 LCE1BQ5T7P3 118 aa5.56□□□□□ -1.52
TRADD-201ENST00000345057 MUC5ACP98088 5654 aa5.56□□□□□ -1.52
TRADD-201ENST00000345057 KRTAP4-2Q9BYR5 136 aa5.49□□□□□ -1.53
TRADD-201ENST00000345057 KRTAP9-9Q9BYP9 154 aa5.48□□□□□ -1.53
TRADD-201ENST00000345057 MUC5BQ9HC84 5762 aaPredicted RBP5.43□□□□□ -1.54
TRADD-201ENST00000345057 AHNAKQ09666 5890 aaKnown RBP5.31□□□□□ -1.56
TRADD-201ENST00000345057 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.23□□□□□ -1.57
TRADD-201ENST00000345057 KRTAP21-2Q3LI59 83 aa4.92□□□□□ -1.62
TRADD-201ENST00000345057 KRTAP5-11Q6L8G4 156 aa4.88□□□□□ -1.63
TRADD-201ENST00000345057 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
TRADD-201ENST00000345057 LCE1FQ5T754 118 aa4.39□□□□□ -1.71
TRADD-201ENST00000345057 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
TRADD-201ENST00000345057 PHGR1C9JFL3 82 aa4.18□□□□□ -1.74
TRADD-201ENST00000345057 MUC19Q7Z5P9 8384 aa3.69□□□□□ -1.82
TRADD-201ENST00000345057 KRTAP21-1Q3LI58 79 aa3.64□□□□□ -1.83
TRADD-201ENST00000345057 MUC16Q8WXI7 14507 aa2.7□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms