RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 KRTAP8-1Q8IUC2 63 aa2.7□□□□□ -1.98
GDNF-202ENST00000344622 KRTAP4-7Q9BYR0 210 aa2.69□□□□□ -1.98
GDNF-202ENST00000344622 MT1EP04732 61 aa2.69□□□□□ -1.98
GDNF-202ENST00000344622 SPRR2FQ96RM1 72 aa2.69□□□□□ -1.98
GDNF-202ENST00000344622 KRTAP9-7A8MTY7 169 aa2.68□□□□□ -1.98
GDNF-202ENST00000344622 KRTAP12-3P60328 96 aa2.67□□□□□ -1.98
GDNF-202ENST00000344622 KRTAP4-3Q9BYR4 195 aa2.65□□□□□ -1.99
GDNF-202ENST00000344622 LCE1AQ5T7P2 110 aa2.64□□□□□ -1.99
GDNF-202ENST00000344622 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
GDNF-202ENST00000344622 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
GDNF-202ENST00000344622 MT1LQ93083 61 aa2.61□□□□□ -1.99
GDNF-202ENST00000344622 LCE5AQ5TCM9 118 aa2.59□□□□□ -2
GDNF-202ENST00000344622 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
GDNF-202ENST00000344622 INE1O15225 51 aa2.57□□□□□ -2
GDNF-202ENST00000344622 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
GDNF-202ENST00000344622 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
GDNF-202ENST00000344622 SPRR2EP22531 72 aa2.54□□□□□ -2
GDNF-202ENST00000344622 SPRR2BP35325 72 aa2.54□□□□□ -2
GDNF-202ENST00000344622 SPRR2AP35326 72 aa2.54□□□□□ -2
GDNF-202ENST00000344622 LOC100996750A0A140TA64 210 aa2.53□□□□□ -2
GDNF-202ENST00000344622 MT1MQ8N339 61 aa2.53□□□□□ -2.01
GDNF-202ENST00000344622 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
GDNF-202ENST00000344622 LCE3CQ5T5A8 94 aa2.48□□□□□ -2.01
GDNF-202ENST00000344622 MT1GP13640 62 aa2.46□□□□□ -2.02
GDNF-202ENST00000344622 LCE4AQ5TA78 99 aa2.45□□□□□ -2.02
GDNF-202ENST00000344622 SPRR2DP22532 72 aa2.43□□□□□ -2.02
GDNF-202ENST00000344622 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
GDNF-202ENST00000344622 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
GDNF-202ENST00000344622 LCE3BQ5TA77 95 aa2.38□□□□□ -2.03
GDNF-202ENST00000344622 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
GDNF-202ENST00000344622 KRTAP9-4Q9BYQ2 154 aa2.33□□□□□ -2.04
GDNF-202ENST00000344622 LCE1EQ5T753 118 aa2.3□□□□□ -2.04
GDNF-202ENST00000344622 KRTAP4-9Q9BYQ8 210 aa2.29□□□□□ -2.04
GDNF-202ENST00000344622 KRTAP9-9Q9BYP9 154 aa2.29□□□□□ -2.04
GDNF-202ENST00000344622 KRTAP20-1Q3LI63 56 aa2.29□□□□□ -2.04
GDNF-202ENST00000344622 KRTAP2-3P0C7H8 128 aa2.28□□□□□ -2.04
GDNF-202ENST00000344622 KRTAP2-4Q9BYR9 128 aa2.28□□□□□ -2.04
GDNF-202ENST00000344622 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
GDNF-202ENST00000344622 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
GDNF-202ENST00000344622 KRTAP4-6Q9BYQ5 205 aa2.27□□□□□ -2.05
GDNF-202ENST00000344622 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
GDNF-202ENST00000344622 KRTAP2-2Q9BYT5 123 aa2.24□□□□□ -2.05
GDNF-202ENST00000344622 KRTAP2-1Q9BYU5 128 aa2.24□□□□□ -2.05
GDNF-202ENST00000344622 MT4P47944 62 aa2.21□□□□□ -2.06
GDNF-202ENST00000344622 LCE1DQ5T752 114 aa2.2□□□□□ -2.06
GDNF-202ENST00000344622 KRTAP19-4Q3LI73 84 aa2.18□□□□□ -2.06
GDNF-202ENST00000344622 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
GDNF-202ENST00000344622 MT1AP04731 61 aa2.14□□□□□ -2.07
GDNF-202ENST00000344622 KRTAP20-2Q3LI61 65 aa2.11□□□□□ -2.07
GDNF-202ENST00000344622 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
GDNF-202ENST00000344622 KRTAP5-3Q6L8H2 238 aa2.08□□□□□ -2.08
GDNF-202ENST00000344622 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
GDNF-202ENST00000344622 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
GDNF-202ENST00000344622 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
GDNF-202ENST00000344622 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
GDNF-202ENST00000344622 PRM1P04553 51 aa1.92□□□□□ -2.1
GDNF-202ENST00000344622 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
GDNF-202ENST00000344622 MT3P25713 68 aa1.88□□□□□ -2.11
GDNF-202ENST00000344622 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
GDNF-202ENST00000344622 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
GDNF-202ENST00000344622 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.11
GDNF-202ENST00000344622 KRTAP4-11Q9BYQ6 195 aa1.84□□□□□ -2.11
GDNF-202ENST00000344622 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
GDNF-202ENST00000344622 KRTAP5-1Q6L8H4 278 aa1.83□□□□□ -2.12
GDNF-202ENST00000344622 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
GDNF-202ENST00000344622 KRTAP4-2Q9BYR5 136 aa1.71□□□□□ -2.14
GDNF-202ENST00000344622 KRTAP4-12Q9BQ66 201 aa1.71□□□□□ -2.14
GDNF-202ENST00000344622 LCE1BQ5T7P3 118 aa1.68□□□□□ -2.14
GDNF-202ENST00000344622 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
GDNF-202ENST00000344622 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
GDNF-202ENST00000344622 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
GDNF-202ENST00000344622 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
GDNF-202ENST00000344622 KRTAP5-11Q6L8G4 156 aa1.43□□□□□ -2.18
GDNF-202ENST00000344622 KRTAP4-4Q9BYR3 166 aa1.43□□□□□ -2.18
GDNF-202ENST00000344622 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
GDNF-202ENST00000344622 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
GDNF-202ENST00000344622 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 79.8 ms