RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 SPRR2FQ96RM1 72 aa5.96□□□□□ -1.46
CEACAM1-202ENST00000344391 MUC12Q9UKN1 5478 aa5.94□□□□□ -1.46
CEACAM1-202ENST00000344391 KRTAP6-3Q3LI67 103 aa5.92□□□□□ -1.46
CEACAM1-202ENST00000344391 MT1LQ93083 61 aa5.83□□□□□ -1.48
CEACAM1-202ENST00000344391 KRTAP9-7A8MTY7 169 aa5.8□□□□□ -1.48
CEACAM1-202ENST00000344391 MDN1Q9NU22 5596 aa5.8□□□□□ -1.48
CEACAM1-202ENST00000344391 KRTAP19-3Q7Z4W3 81 aa5.77□□□□□ -1.48
CEACAM1-202ENST00000344391 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
CEACAM1-202ENST00000344391 LCE1AQ5T7P2 110 aa5.73□□□□□ -1.49
CEACAM1-202ENST00000344391 MT1GP13640 62 aa5.71□□□□□ -1.5
CEACAM1-202ENST00000344391 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
CEACAM1-202ENST00000344391 SPRR2EP22531 72 aa5.69□□□□□ -1.5
CEACAM1-202ENST00000344391 SPRR2BP35325 72 aa5.69□□□□□ -1.5
CEACAM1-202ENST00000344391 SPRR2AP35326 72 aa5.69□□□□□ -1.5
CEACAM1-202ENST00000344391 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
CEACAM1-202ENST00000344391 MT1MQ8N339 61 aa5.63□□□□□ -1.51
CEACAM1-202ENST00000344391 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
CEACAM1-202ENST00000344391 LOC100996750A0A140TA64 210 aa5.61□□□□□ -1.51
CEACAM1-202ENST00000344391 KRTAP4-6Q9BYQ5 205 aa5.61□□□□□ -1.51
CEACAM1-202ENST00000344391 NEBP20929 6669 aa5.58□□□□□ -1.52
CEACAM1-202ENST00000344391 SPRR5A0A1B0GTR4 108 aa5.52□□□□□ -1.53
CEACAM1-202ENST00000344391 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
CEACAM1-202ENST00000344391 SPRR2DP22532 72 aa5.48□□□□□ -1.53
CEACAM1-202ENST00000344391 DSTQ03001 7570 aaKnown RBP5.38□□□□□ -1.55
CEACAM1-202ENST00000344391 KRTAP9-6A8MVA2 160 aa5.37□□□□□ -1.55
CEACAM1-202ENST00000344391 INE1O15225 51 aa5.32□□□□□ -1.56
CEACAM1-202ENST00000344391 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
CEACAM1-202ENST00000344391 KRTAP2-3P0C7H8 128 aa5.2□□□□□ -1.58
CEACAM1-202ENST00000344391 KRTAP2-4Q9BYR9 128 aa5.2□□□□□ -1.58
CEACAM1-202ENST00000344391 KRTAP20-1Q3LI63 56 aa5.14□□□□□ -1.59
CEACAM1-202ENST00000344391 KRTAP5-5Q701N2 237 aaPredicted RBP5.11□□□□□ -1.59
CEACAM1-202ENST00000344391 KRTAP2-2Q9BYT5 123 aa5.08□□□□□ -1.6
CEACAM1-202ENST00000344391 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
CEACAM1-202ENST00000344391 MT1AP04731 61 aa4.96□□□□□ -1.62
CEACAM1-202ENST00000344391 KRTAP5-4Q6L8H1 288 aa4.95□□□□□ -1.62
CEACAM1-202ENST00000344391 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
CEACAM1-202ENST00000344391 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
CEACAM1-202ENST00000344391 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
CEACAM1-202ENST00000344391 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
CEACAM1-202ENST00000344391 MT4P47944 62 aa4.75□□□□□ -1.65
CEACAM1-202ENST00000344391 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
CEACAM1-202ENST00000344391 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
CEACAM1-202ENST00000344391 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
CEACAM1-202ENST00000344391 HMCN1Q96RW7 5635 aa4.71□□□□□ -1.66
CEACAM1-202ENST00000344391 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
CEACAM1-202ENST00000344391 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
CEACAM1-202ENST00000344391 KRTAP6-2Q3LI66 62 aa4.55□□□□□ -1.68
CEACAM1-202ENST00000344391 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
CEACAM1-202ENST00000344391 MT3P25713 68 aa4.5□□□□□ -1.69
CEACAM1-202ENST00000344391 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
CEACAM1-202ENST00000344391 KRTAP5-2Q701N4 177 aa4.46□□□□□ -1.69
CEACAM1-202ENST00000344391 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
CEACAM1-202ENST00000344391 AHNAK2Q8IVF2 5795 aa4.23□□□□□ -1.73
CEACAM1-202ENST00000344391 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
CEACAM1-202ENST00000344391 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
CEACAM1-202ENST00000344391 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
CEACAM1-202ENST00000344391 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.76
CEACAM1-202ENST00000344391 GPR98Q8WXG9 6306 aa4.03□□□□□ -1.76
CEACAM1-202ENST00000344391 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
CEACAM1-202ENST00000344391 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
CEACAM1-202ENST00000344391 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
CEACAM1-202ENST00000344391 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
CEACAM1-202ENST00000344391 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
CEACAM1-202ENST00000344391 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
CEACAM1-202ENST00000344391 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
CEACAM1-202ENST00000344391 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
CEACAM1-202ENST00000344391 PRM1P04553 51 aa3.49□□□□□ -1.85
CEACAM1-202ENST00000344391 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
CEACAM1-202ENST00000344391 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
CEACAM1-202ENST00000344391 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
CEACAM1-202ENST00000344391 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
CEACAM1-202ENST00000344391 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
CEACAM1-202ENST00000344391 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
CEACAM1-202ENST00000344391 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
CEACAM1-202ENST00000344391 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
CEACAM1-202ENST00000344391 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
CEACAM1-202ENST00000344391 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
CEACAM1-202ENST00000344391 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 105.7 ms