RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 INE1O15225 51 aa2.99□□□□□ -1.93
HMGCR-202ENST00000343975 KRTAP5-9P26371 169 aa2.98□□□□□ -1.93
HMGCR-202ENST00000343975 SYNE2Q8WXH0 6885 aaKnown RBP2.97□□□□□ -1.93
HMGCR-202ENST00000343975 KRTAP19-4Q3LI73 84 aa2.96□□□□□ -1.94
HMGCR-202ENST00000343975 MT1EP04732 61 aa2.96□□□□□ -1.94
HMGCR-202ENST00000343975 SPRR2DP22532 72 aa2.95□□□□□ -1.94
HMGCR-202ENST00000343975 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
HMGCR-202ENST00000343975 MT1GP13640 62 aa2.93□□□□□ -1.94
HMGCR-202ENST00000343975 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
HMGCR-202ENST00000343975 LCE1AQ5T7P2 110 aa2.91□□□□□ -1.94
HMGCR-202ENST00000343975 SPRR5A0A1B0GTR4 108 aa2.89□□□□□ -1.95
HMGCR-202ENST00000343975 MT1LQ93083 61 aa2.88□□□□□ -1.95
HMGCR-202ENST00000343975 KMT2DO14686 5537 aa2.86□□□□□ -1.95
HMGCR-202ENST00000343975 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.95
HMGCR-202ENST00000343975 KRTAP2-3P0C7H8 128 aa2.82□□□□□ -1.96
HMGCR-202ENST00000343975 KRTAP2-4Q9BYR9 128 aa2.82□□□□□ -1.96
HMGCR-202ENST00000343975 NEBP20929 6669 aa2.82□□□□□ -1.96
HMGCR-202ENST00000343975 MT1MQ8N339 61 aa2.81□□□□□ -1.96
HMGCR-202ENST00000343975 LCE5AQ5TCM9 118 aa2.81□□□□□ -1.96
HMGCR-202ENST00000343975 LCE3CQ5T5A8 94 aa2.81□□□□□ -1.96
HMGCR-202ENST00000343975 LCE3BQ5TA77 95 aa2.8□□□□□ -1.96
HMGCR-202ENST00000343975 MUC12Q9UKN1 5478 aa2.78□□□□□ -1.96
HMGCR-202ENST00000343975 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
HMGCR-202ENST00000343975 KRTAP2-2Q9BYT5 123 aa2.74□□□□□ -1.97
HMGCR-202ENST00000343975 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
HMGCR-202ENST00000343975 KRTAP4-7Q9BYR0 210 aa2.71□□□□□ -1.98
HMGCR-202ENST00000343975 KRTAP4-3Q9BYR4 195 aa2.67□□□□□ -1.98
HMGCR-202ENST00000343975 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
HMGCR-202ENST00000343975 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
HMGCR-202ENST00000343975 LCE4AQ5TA78 99 aa2.59□□□□□ -1.99
HMGCR-202ENST00000343975 LOC100996750A0A140TA64 210 aa2.55□□□□□ -2
HMGCR-202ENST00000343975 MT4P47944 62 aa2.54□□□□□ -2
HMGCR-202ENST00000343975 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
HMGCR-202ENST00000343975 MT1AP04731 61 aa2.5□□□□□ -2.01
HMGCR-202ENST00000343975 KRTAP4-9Q9BYQ8 210 aa2.49□□□□□ -2.01
HMGCR-202ENST00000343975 KRTAP9-6A8MVA2 160 aa2.46□□□□□ -2.02
HMGCR-202ENST00000343975 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
HMGCR-202ENST00000343975 LCE1DQ5T752 114 aa2.44□□□□□ -2.02
HMGCR-202ENST00000343975 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
HMGCR-202ENST00000343975 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.02
HMGCR-202ENST00000343975 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
HMGCR-202ENST00000343975 MT3P25713 68 aa2.36□□□□□ -2.03
HMGCR-202ENST00000343975 KRTAP4-6Q9BYQ5 205 aa2.36□□□□□ -2.03
HMGCR-202ENST00000343975 KRTAP9-4Q9BYQ2 154 aa2.36□□□□□ -2.03
HMGCR-202ENST00000343975 KRTAP20-2Q3LI61 65 aa2.34□□□□□ -2.03
HMGCR-202ENST00000343975 KRTAP6-2Q3LI66 62 aa2.29□□□□□ -2.04
HMGCR-202ENST00000343975 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
HMGCR-202ENST00000343975 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
HMGCR-202ENST00000343975 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
HMGCR-202ENST00000343975 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
HMGCR-202ENST00000343975 KRTAP5-3Q6L8H2 238 aa2.16□□□□□ -2.06
HMGCR-202ENST00000343975 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
HMGCR-202ENST00000343975 KRTAP4-11Q9BYQ6 195 aa2.1□□□□□ -2.07
HMGCR-202ENST00000343975 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
HMGCR-202ENST00000343975 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
HMGCR-202ENST00000343975 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
HMGCR-202ENST00000343975 LCE1EQ5T753 118 aa2□□□□□ -2.09
HMGCR-202ENST00000343975 KRTAP9-9Q9BYP9 154 aa1.99□□□□□ -2.09
HMGCR-202ENST00000343975 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
HMGCR-202ENST00000343975 PRM1P04553 51 aa1.96□□□□□ -2.1
HMGCR-202ENST00000343975 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
HMGCR-202ENST00000343975 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
HMGCR-202ENST00000343975 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
HMGCR-202ENST00000343975 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
HMGCR-202ENST00000343975 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
HMGCR-202ENST00000343975 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
HMGCR-202ENST00000343975 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
HMGCR-202ENST00000343975 KRTAP4-2Q9BYR5 136 aa1.78□□□□□ -2.13
HMGCR-202ENST00000343975 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
HMGCR-202ENST00000343975 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
HMGCR-202ENST00000343975 KRTAP5-11Q6L8G4 156 aa1.63□□□□□ -2.15
HMGCR-202ENST00000343975 KRTAP4-12Q9BQ66 201 aa1.62□□□□□ -2.15
HMGCR-202ENST00000343975 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
HMGCR-202ENST00000343975 KRTAP4-4Q9BYR3 166 aa1.45□□□□□ -2.18
HMGCR-202ENST00000343975 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
HMGCR-202ENST00000343975 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
HMGCR-202ENST00000343975 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms