RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 DMAC1Q96GE9 116 aa6.15□□□□□ -1.42
MUC1-204ENST00000343256 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
MUC1-204ENST00000343256 BRK1Q8WUW1 75 aa6□□□□□ -1.45
MUC1-204ENST00000343256 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
MUC1-204ENST00000343256 SYNE1Q8NF91 8797 aaKnown RBP5.9□□□□□ -1.47
MUC1-204ENST00000343256 KRTAP12-4P60329 112 aa5.89□□□□□ -1.47
MUC1-204ENST00000343256 KRTAP5-5Q701N2 237 aaPredicted RBP5.88□□□□□ -1.47
MUC1-204ENST00000343256 SPTSSBQ8NFR3 76 aa5.88□□□□□ -1.47
MUC1-204ENST00000343256 COA5Q86WW8 74 aa5.87□□□□□ -1.47
MUC1-204ENST00000343256 C10orf95Q9H7T3 257 aa5.87□□□□□ -1.47
MUC1-204ENST00000343256 LINC01558Q9Y6Z2 57 aa5.86□□□□□ -1.47
MUC1-204ENST00000343256 ACYP2P14621 99 aa5.85□□□□□ -1.47
MUC1-204ENST00000343256 AHNAKQ09666 5890 aaKnown RBP5.85□□□□□ -1.47
MUC1-204ENST00000343256 CHKB-CPT1BH3BT56 60 aa5.83□□□□□ -1.48
MUC1-204ENST00000343256 PSPHP1O15172 72 aa5.83□□□□□ -1.48
MUC1-204ENST00000343256 PMAIP1Q13794 54 aa5.82□□□□□ -1.48
MUC1-204ENST00000343256 KRTAP4-11Q9BYQ6 195 aa5.82□□□□□ -1.48
MUC1-204ENST00000343256 MUC5ACP98088 5654 aa5.81□□□□□ -1.48
MUC1-204ENST00000343256 PRR15LQ9BU68 103 aa5.8□□□□□ -1.48
MUC1-204ENST00000343256 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
MUC1-204ENST00000343256 CDC42SE1Q9NRR8 79 aa5.78□□□□□ -1.48
MUC1-204ENST00000343256 A6NED7 52 aa5.77□□□□□ -1.49
MUC1-204ENST00000343256 MUC5BQ9HC84 5762 aaPredicted RBP5.76□□□□□ -1.49
MUC1-204ENST00000343256 SPINT4Q6UDR6 99 aa5.73□□□□□ -1.49
MUC1-204ENST00000343256 KRTAP5-8O75690 187 aa5.7□□□□□ -1.5
MUC1-204ENST00000343256 KTN1-AS1Q86SY8 53 aa5.68□□□□□ -1.5
MUC1-204ENST00000343256 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
MUC1-204ENST00000343256 SEC61GP60059 68 aa5.64□□□□□ -1.51
MUC1-204ENST00000343256 A0A1B0GU69 56 aa5.61□□□□□ -1.51
MUC1-204ENST00000343256 SPATA8Q6RVD6 105 aa5.6□□□□□ -1.51
MUC1-204ENST00000343256 UQCR11O14957 56 aa5.59□□□□□ -1.51
MUC1-204ENST00000343256 KRTAP12-1P59990 96 aa5.59□□□□□ -1.51
MUC1-204ENST00000343256 KRTAP5-2Q701N4 177 aa5.54□□□□□ -1.52
MUC1-204ENST00000343256 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
MUC1-204ENST00000343256 TNP1P09430 55 aa5.5□□□□□ -1.53
MUC1-204ENST00000343256 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
MUC1-204ENST00000343256 KRTAP9-9Q9BYP9 154 aa5.48□□□□□ -1.53
MUC1-204ENST00000343256 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
MUC1-204ENST00000343256 A8MU10 97 aa5.43□□□□□ -1.54
MUC1-204ENST00000343256 A0A1B0GU33 70 aa5.35□□□□□ -1.55
MUC1-204ENST00000343256 K7ERS5 55 aa5.34□□□□□ -1.55
MUC1-204ENST00000343256 KRTAP6-1Q3LI64 71 aa5.31□□□□□ -1.56
MUC1-204ENST00000343256 MT1AP04731 61 aa5.25□□□□□ -1.57
MUC1-204ENST00000343256 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.58
MUC1-204ENST00000343256 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
MUC1-204ENST00000343256 KRTAP5-1Q6L8H4 278 aa5.12□□□□□ -1.59
MUC1-204ENST00000343256 PRAC1Q96KF2 57 aa5.12□□□□□ -1.59
MUC1-204ENST00000343256 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.59
MUC1-204ENST00000343256 ROMO1P60602 79 aa5.06□□□□□ -1.6
MUC1-204ENST00000343256 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
MUC1-204ENST00000343256 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
MUC1-204ENST00000343256 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
MUC1-204ENST00000343256 MT3P25713 68 aa4.82□□□□□ -1.64
MUC1-204ENST00000343256 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
MUC1-204ENST00000343256 H3BS24 57 aa4.76□□□□□ -1.65
MUC1-204ENST00000343256 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
MUC1-204ENST00000343256 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
MUC1-204ENST00000343256 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
MUC1-204ENST00000343256 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
MUC1-204ENST00000343256 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
MUC1-204ENST00000343256 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
MUC1-204ENST00000343256 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
MUC1-204ENST00000343256 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
MUC1-204ENST00000343256 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
MUC1-204ENST00000343256 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
MUC1-204ENST00000343256 PHGR1C9JFL3 82 aa4.04□□□□□ -1.76
MUC1-204ENST00000343256 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
MUC1-204ENST00000343256 INE1O15225 51 aa3.9□□□□□ -1.79
MUC1-204ENST00000343256 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
MUC1-204ENST00000343256 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
MUC1-204ENST00000343256 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
MUC1-204ENST00000343256 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
MUC1-204ENST00000343256 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
MUC1-204ENST00000343256 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
MUC1-204ENST00000343256 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
MUC1-204ENST00000343256 PRM1P04553 51 aa2.56□□□□□ -2
MUC1-204ENST00000343256 MUC16Q8WXI7 14507 aa2.36□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 6.8 ms