RNA–Protein interactions for RNA: ENST00000342916.7

EGFR-202, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-202ENST00000342916 A0A0A0MQY5 61 aa6.93□□□□□ -1.3
EGFR-202ENST00000342916 KRTAP5-9P26371 169 aa6.93□□□□□ -1.3
EGFR-202ENST00000342916 MDN1Q9NU22 5596 aa6.92□□□□□ -1.3
EGFR-202ENST00000342916 SPRR5A0A1B0GTR4 108 aa6.91□□□□□ -1.3
EGFR-202ENST00000342916 MT1EP04732 61 aa6.82□□□□□ -1.32
EGFR-202ENST00000342916 NEBP20929 6669 aa6.71□□□□□ -1.33
EGFR-202ENST00000342916 MT1LQ93083 61 aa6.71□□□□□ -1.34
EGFR-202ENST00000342916 LCE3CQ5T5A8 94 aa6.7□□□□□ -1.34
EGFR-202ENST00000342916 LCE1AQ5T7P2 110 aa6.69□□□□□ -1.34
EGFR-202ENST00000342916 SPRR2EP22531 72 aa6.68□□□□□ -1.34
EGFR-202ENST00000342916 SPRR2BP35325 72 aa6.68□□□□□ -1.34
EGFR-202ENST00000342916 SPRR2AP35326 72 aa6.68□□□□□ -1.34
EGFR-202ENST00000342916 KRTAP19-3Q7Z4W3 81 aa6.6□□□□□ -1.35
EGFR-202ENST00000342916 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
EGFR-202ENST00000342916 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
EGFR-202ENST00000342916 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
EGFR-202ENST00000342916 MT1GP13640 62 aa6.49□□□□□ -1.37
EGFR-202ENST00000342916 DSTQ03001 7570 aaKnown RBP6.49□□□□□ -1.37
EGFR-202ENST00000342916 MT1MQ8N339 61 aa6.45□□□□□ -1.38
EGFR-202ENST00000342916 SPRR2DP22532 72 aa6.43□□□□□ -1.38
EGFR-202ENST00000342916 KRTAP9-6A8MVA2 160 aa6.42□□□□□ -1.38
EGFR-202ENST00000342916 KRTAP4-3Q9BYR4 195 aa6.41□□□□□ -1.38
EGFR-202ENST00000342916 LCE3BQ5TA77 95 aa6.2□□□□□ -1.42
EGFR-202ENST00000342916 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
EGFR-202ENST00000342916 KRTAP20-1Q3LI63 56 aa6.14□□□□□ -1.43
EGFR-202ENST00000342916 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
EGFR-202ENST00000342916 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
EGFR-202ENST00000342916 KRTAP2-2Q9BYT5 123 aa5.98□□□□□ -1.45
EGFR-202ENST00000342916 KRTAP2-1Q9BYU5 128 aa5.98□□□□□ -1.45
EGFR-202ENST00000342916 INE1O15225 51 aa5.96□□□□□ -1.46
EGFR-202ENST00000342916 KRTAP5-5Q701N2 237 aaPredicted RBP5.84□□□□□ -1.47
EGFR-202ENST00000342916 KRTAP5-4Q6L8H1 288 aa5.71□□□□□ -1.49
EGFR-202ENST00000342916 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
EGFR-202ENST00000342916 KRTAP6-1Q3LI64 71 aa5.67□□□□□ -1.5
EGFR-202ENST00000342916 MT1AP04731 61 aa5.66□□□□□ -1.5
EGFR-202ENST00000342916 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
EGFR-202ENST00000342916 MT4P47944 62 aa5.64□□□□□ -1.51
EGFR-202ENST00000342916 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
EGFR-202ENST00000342916 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.51
EGFR-202ENST00000342916 LCE1DQ5T752 114 aa5.58□□□□□ -1.52
EGFR-202ENST00000342916 KRTAP4-6Q9BYQ5 205 aa5.58□□□□□ -1.52
EGFR-202ENST00000342916 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
EGFR-202ENST00000342916 KRTAP20-2Q3LI61 65 aa5.38□□□□□ -1.55
EGFR-202ENST00000342916 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
EGFR-202ENST00000342916 KRTAP6-2Q3LI66 62 aa5.24□□□□□ -1.57
EGFR-202ENST00000342916 KRTAP5-3Q6L8H2 238 aa5.2□□□□□ -1.58
EGFR-202ENST00000342916 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
EGFR-202ENST00000342916 MT3P25713 68 aa5.1□□□□□ -1.59
EGFR-202ENST00000342916 AHNAK2Q8IVF2 5795 aa5.08□□□□□ -1.6
EGFR-202ENST00000342916 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
EGFR-202ENST00000342916 LCE3DQ9BYE3 92 aa5.04□□□□□ -1.6
EGFR-202ENST00000342916 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
EGFR-202ENST00000342916 GPR98Q8WXG9 6306 aa4.86□□□□□ -1.63
EGFR-202ENST00000342916 KRTAP5-10Q6L8G5 202 aa4.8□□□□□ -1.64
EGFR-202ENST00000342916 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
EGFR-202ENST00000342916 KRTAP5-8O75690 187 aa4.58□□□□□ -1.68
EGFR-202ENST00000342916 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
EGFR-202ENST00000342916 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
EGFR-202ENST00000342916 LCE1EQ5T753 118 aa4.46□□□□□ -1.69
EGFR-202ENST00000342916 KRTAP5-7Q6L8G8 165 aa4.46□□□□□ -1.7
EGFR-202ENST00000342916 PRM1P04553 51 aa4.43□□□□□ -1.7
EGFR-202ENST00000342916 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
EGFR-202ENST00000342916 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
EGFR-202ENST00000342916 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
EGFR-202ENST00000342916 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
EGFR-202ENST00000342916 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
EGFR-202ENST00000342916 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
EGFR-202ENST00000342916 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
EGFR-202ENST00000342916 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
EGFR-202ENST00000342916 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
EGFR-202ENST00000342916 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.82
EGFR-202ENST00000342916 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
EGFR-202ENST00000342916 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
EGFR-202ENST00000342916 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
EGFR-202ENST00000342916 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
EGFR-202ENST00000342916 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
EGFR-202ENST00000342916 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 88.5 ms