RNA–Protein interactions for RNA: ENST00000342835.8

SPTB-201, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 1,723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-201ENST00000342835 KMT2DO14686 5537 aa7.92□□□□□ -1.14
SPTB-201ENST00000342835 LCE3CQ5T5A8 94 aa7.9□□□□□ -1.14
SPTB-201ENST00000342835 MT1EP04732 61 aa7.88□□□□□ -1.15
SPTB-201ENST00000342835 KRTAP6-3Q3LI67 103 aa7.78□□□□□ -1.16
SPTB-201ENST00000342835 MT1LQ93083 61 aa7.78□□□□□ -1.16
SPTB-201ENST00000342835 MUC12Q9UKN1 5478 aa7.55□□□□□ -1.2
SPTB-201ENST00000342835 KRTAP19-3Q7Z4W3 81 aa7.53□□□□□ -1.2
SPTB-201ENST00000342835 KRTAP5-9P26371 169 aa7.52□□□□□ -1.21
SPTB-201ENST00000342835 MT1GP13640 62 aa7.51□□□□□ -1.21
SPTB-201ENST00000342835 SPRR2FQ96RM1 72 aa7.5□□□□□ -1.21
SPTB-201ENST00000342835 KRTAP4-7Q9BYR0 210 aa7.48□□□□□ -1.21
SPTB-201ENST00000342835 NEBP20929 6669 aa7.46□□□□□ -1.21
SPTB-201ENST00000342835 MT1MQ8N339 61 aa7.4□□□□□ -1.23
SPTB-201ENST00000342835 KRTAP9-6A8MVA2 160 aa7.38□□□□□ -1.23
SPTB-201ENST00000342835 MDN1Q9NU22 5596 aa7.36□□□□□ -1.23
SPTB-201ENST00000342835 LCE5AQ5TCM9 118 aa7.34□□□□□ -1.23
SPTB-201ENST00000342835 INE1O15225 51 aa7.24□□□□□ -1.25
SPTB-201ENST00000342835 KRTAP4-3Q9BYR4 195 aa7.19□□□□□ -1.26
SPTB-201ENST00000342835 SPRR2EP22531 72 aa7.17□□□□□ -1.26
SPTB-201ENST00000342835 SPRR2BP35325 72 aa7.17□□□□□ -1.26
SPTB-201ENST00000342835 SPRR2AP35326 72 aa7.17□□□□□ -1.26
SPTB-201ENST00000342835 LCE1AQ5T7P2 110 aa7.15□□□□□ -1.27
SPTB-201ENST00000342835 KRTAP20-1Q3LI63 56 aa7.11□□□□□ -1.27
SPTB-201ENST00000342835 KRTAP2-3P0C7H8 128 aa7.05□□□□□ -1.28
SPTB-201ENST00000342835 KRTAP2-4Q9BYR9 128 aa7.05□□□□□ -1.28
SPTB-201ENST00000342835 KRTAP2-1Q9BYU5 128 aa7.05□□□□□ -1.28
SPTB-201ENST00000342835 LOC100996750A0A140TA64 210 aa7.02□□□□□ -1.29
SPTB-201ENST00000342835 SPRR2DP22532 72 aa6.91□□□□□ -1.3
SPTB-201ENST00000342835 KRTAP2-2Q9BYT5 123 aa6.76□□□□□ -1.33
SPTB-201ENST00000342835 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
SPTB-201ENST00000342835 DSTQ03001 7570 aaKnown RBP6.64□□□□□ -1.35
SPTB-201ENST00000342835 MT1AP04731 61 aa6.64□□□□□ -1.35
SPTB-201ENST00000342835 KRTAP5-5Q701N2 237 aaPredicted RBP6.62□□□□□ -1.35
SPTB-201ENST00000342835 KRTAP6-1Q3LI64 71 aa6.52□□□□□ -1.37
SPTB-201ENST00000342835 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
SPTB-201ENST00000342835 KRTAP9-4Q9BYQ2 154 aa6.27□□□□□ -1.41
SPTB-201ENST00000342835 KRTAP5-4Q6L8H1 288 aa6.19□□□□□ -1.42
SPTB-201ENST00000342835 KRTAP12-4P60329 112 aa6.16□□□□□ -1.42
SPTB-201ENST00000342835 LCE1DQ5T752 114 aa6.13□□□□□ -1.43
SPTB-201ENST00000342835 SYNE1Q8NF91 8797 aaKnown RBP6.12□□□□□ -1.43
SPTB-201ENST00000342835 LCE4AQ5TA78 99 aa6.1□□□□□ -1.43
SPTB-201ENST00000342835 MT4P47944 62 aa6.07□□□□□ -1.44
SPTB-201ENST00000342835 MT3P25713 68 aa6.02□□□□□ -1.45
SPTB-201ENST00000342835 HMCN1Q96RW7 5635 aa6□□□□□ -1.45
SPTB-201ENST00000342835 LCE3DQ9BYE3 92 aa5.99□□□□□ -1.45
SPTB-201ENST00000342835 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
SPTB-201ENST00000342835 KRTAP6-2Q3LI66 62 aa5.96□□□□□ -1.46
SPTB-201ENST00000342835 LCE3EQ5T5B0 92 aa5.88□□□□□ -1.47
SPTB-201ENST00000342835 GPR98Q8WXG9 6306 aa5.88□□□□□ -1.47
SPTB-201ENST00000342835 KRTAP20-2Q3LI61 65 aa5.77□□□□□ -1.49
SPTB-201ENST00000342835 AHNAK2Q8IVF2 5795 aa5.75□□□□□ -1.49
SPTB-201ENST00000342835 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
SPTB-201ENST00000342835 KRTAP5-10Q6L8G5 202 aa5.6□□□□□ -1.51
SPTB-201ENST00000342835 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
SPTB-201ENST00000342835 KRTAP5-7Q6L8G8 165 aa5.33□□□□□ -1.56
SPTB-201ENST00000342835 OBSCNQ5VST9 7968 aa5.31□□□□□ -1.56
SPTB-201ENST00000342835 PRM1P04553 51 aa5.24□□□□□ -1.57
SPTB-201ENST00000342835 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
SPTB-201ENST00000342835 LCE1EQ5T753 118 aa5.15□□□□□ -1.58
SPTB-201ENST00000342835 KRTAP5-8O75690 187 aa5.03□□□□□ -1.6
SPTB-201ENST00000342835 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
SPTB-201ENST00000342835 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
SPTB-201ENST00000342835 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
SPTB-201ENST00000342835 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
SPTB-201ENST00000342835 KRTAP4-2Q9BYR5 136 aa4.72□□□□□ -1.65
SPTB-201ENST00000342835 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
SPTB-201ENST00000342835 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
SPTB-201ENST00000342835 AHNAKQ09666 5890 aaKnown RBP4.63□□□□□ -1.67
SPTB-201ENST00000342835 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.52□□□□□ -1.69
SPTB-201ENST00000342835 KRTAP21-2Q3LI59 83 aa4.26□□□□□ -1.73
SPTB-201ENST00000342835 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
SPTB-201ENST00000342835 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
SPTB-201ENST00000342835 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
SPTB-201ENST00000342835 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
SPTB-201ENST00000342835 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
SPTB-201ENST00000342835 KRTAP21-1Q3LI58 79 aa3.27□□□□□ -1.89
SPTB-201ENST00000342835 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
SPTB-201ENST00000342835 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 67 ms