RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 KRTAP15-1Q3LI76 137 aa7.43□□□□□ -1.22
SNX21-201ENST00000342644 SPRR2EP22531 72 aa7.42□□□□□ -1.22
SNX21-201ENST00000342644 SPRR2BP35325 72 aa7.42□□□□□ -1.22
SNX21-201ENST00000342644 SPRR2AP35326 72 aa7.42□□□□□ -1.22
SNX21-201ENST00000342644 KRTAP19-3Q7Z4W3 81 aa7.4□□□□□ -1.22
SNX21-201ENST00000342644 MT1LQ93083 61 aa7.38□□□□□ -1.23
SNX21-201ENST00000342644 LCE5AQ5TCM9 118 aa7.33□□□□□ -1.24
SNX21-201ENST00000342644 MT1GP13640 62 aa7.32□□□□□ -1.24
SNX21-201ENST00000342644 NEBP20929 6669 aa7.29□□□□□ -1.24
SNX21-201ENST00000342644 KRTAP19-4Q3LI73 84 aa7.27□□□□□ -1.25
SNX21-201ENST00000342644 MT1MQ8N339 61 aa7.18□□□□□ -1.26
SNX21-201ENST00000342644 SPRR2DP22532 72 aa7.16□□□□□ -1.26
SNX21-201ENST00000342644 SPRR5A0A1B0GTR4 108 aa7.12□□□□□ -1.27
SNX21-201ENST00000342644 LUZP6Q538Z0 58 aa7.06□□□□□ -1.28
SNX21-201ENST00000342644 LCE3CQ5T5A8 94 aa7.06□□□□□ -1.28
SNX21-201ENST00000342644 KRTAP4-7Q9BYR0 210 aa7.03□□□□□ -1.28
SNX21-201ENST00000342644 KRTAP2-3P0C7H8 128 aa6.96□□□□□ -1.3
SNX21-201ENST00000342644 KRTAP2-4Q9BYR9 128 aa6.96□□□□□ -1.3
SNX21-201ENST00000342644 KRTAP4-3Q9BYR4 195 aa6.95□□□□□ -1.3
SNX21-201ENST00000342644 LCE3BQ5TA77 95 aa6.93□□□□□ -1.3
SNX21-201ENST00000342644 KRTAP20-1Q3LI63 56 aa6.91□□□□□ -1.3
SNX21-201ENST00000342644 DSTQ03001 7570 aaKnown RBP6.85□□□□□ -1.31
SNX21-201ENST00000342644 NDUFAF8A1L188 74 aa6.83□□□□□ -1.32
SNX21-201ENST00000342644 KRTAP2-2Q9BYT5 123 aa6.79□□□□□ -1.32
SNX21-201ENST00000342644 KRTAP2-1Q9BYU5 128 aa6.79□□□□□ -1.32
SNX21-201ENST00000342644 KRTAP9-6A8MVA2 160 aa6.64□□□□□ -1.35
SNX21-201ENST00000342644 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
SNX21-201ENST00000342644 KRTAP5-5Q701N2 237 aaPredicted RBP6.55□□□□□ -1.36
SNX21-201ENST00000342644 KRTAP5-4Q6L8H1 288 aa6.45□□□□□ -1.38
SNX21-201ENST00000342644 LCE4AQ5TA78 99 aa6.42□□□□□ -1.38
SNX21-201ENST00000342644 MT1AP04731 61 aa6.3□□□□□ -1.4
SNX21-201ENST00000342644 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
SNX21-201ENST00000342644 KRTAP6-1Q3LI64 71 aa6.2□□□□□ -1.42
SNX21-201ENST00000342644 MT4P47944 62 aa6.2□□□□□ -1.42
SNX21-201ENST00000342644 LCE1DQ5T752 114 aa6.2□□□□□ -1.42
SNX21-201ENST00000342644 KRTAP12-4P60329 112 aa6.17□□□□□ -1.42
SNX21-201ENST00000342644 SYNE1Q8NF91 8797 aaKnown RBP6.16□□□□□ -1.42
SNX21-201ENST00000342644 A0A0A0MQY5 61 aa6.13□□□□□ -1.43
SNX21-201ENST00000342644 KRTAP4-6Q9BYQ5 205 aa6.13□□□□□ -1.43
SNX21-201ENST00000342644 H3BS24 57 aa6.09□□□□□ -1.43
SNX21-201ENST00000342644 HMCN1Q96RW7 5635 aa6.07□□□□□ -1.44
SNX21-201ENST00000342644 KRTAP20-2Q3LI61 65 aa6.02□□□□□ -1.45
SNX21-201ENST00000342644 KRTAP9-4Q9BYQ2 154 aa6.01□□□□□ -1.45
SNX21-201ENST00000342644 KRTAP5-3Q6L8H2 238 aa5.84□□□□□ -1.48
SNX21-201ENST00000342644 KRTAP5-2Q701N4 177 aa5.79□□□□□ -1.48
SNX21-201ENST00000342644 KRTAP6-2Q3LI66 62 aa5.78□□□□□ -1.48
SNX21-201ENST00000342644 MT3P25713 68 aa5.73□□□□□ -1.49
SNX21-201ENST00000342644 INE1O15225 51 aa5.72□□□□□ -1.49
SNX21-201ENST00000342644 AHNAK2Q8IVF2 5795 aa5.54□□□□□ -1.52
SNX21-201ENST00000342644 KRTAP5-10Q6L8G5 202 aa5.41□□□□□ -1.54
SNX21-201ENST00000342644 LCE3DQ9BYE3 92 aa5.33□□□□□ -1.56
SNX21-201ENST00000342644 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
SNX21-201ENST00000342644 GPR98Q8WXG9 6306 aa5.27□□□□□ -1.57
SNX21-201ENST00000342644 OBSCNQ5VST9 7968 aa5.21□□□□□ -1.57
SNX21-201ENST00000342644 LCE3EQ5T5B0 92 aa5.2□□□□□ -1.58
SNX21-201ENST00000342644 KRTAP5-8O75690 187 aa5.13□□□□□ -1.59
SNX21-201ENST00000342644 LCE1EQ5T753 118 aa5.12□□□□□ -1.59
SNX21-201ENST00000342644 KRTAP5-7Q6L8G8 165 aa5.1□□□□□ -1.59
SNX21-201ENST00000342644 KRTAP5-1Q6L8H4 278 aa5.05□□□□□ -1.6
SNX21-201ENST00000342644 MUC5ACP98088 5654 aa4.87□□□□□ -1.63
SNX21-201ENST00000342644 LCE1CQ5T751 118 aa4.75□□□□□ -1.65
SNX21-201ENST00000342644 LCE1BQ5T7P3 118 aa4.75□□□□□ -1.65
SNX21-201ENST00000342644 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
SNX21-201ENST00000342644 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
SNX21-201ENST00000342644 PRM1P04553 51 aa4.55□□□□□ -1.68
SNX21-201ENST00000342644 MUC5BQ9HC84 5762 aaPredicted RBP4.49□□□□□ -1.69
SNX21-201ENST00000342644 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
SNX21-201ENST00000342644 AHNAKQ09666 5890 aaKnown RBP4.31□□□□□ -1.72
SNX21-201ENST00000342644 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
SNX21-201ENST00000342644 KRTAP4-12Q9BQ66 201 aa4.13□□□□□ -1.75
SNX21-201ENST00000342644 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
SNX21-201ENST00000342644 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
SNX21-201ENST00000342644 PHGR1C9JFL3 82 aa3.62□□□□□ -1.83
SNX21-201ENST00000342644 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.84
SNX21-201ENST00000342644 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
SNX21-201ENST00000342644 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
SNX21-201ENST00000342644 MUC16Q8WXI7 14507 aa2.3□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms