RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
SNED1-202ENST00000342631 MT1EP04732 61 aa6□□□□□ -1.45
SNED1-202ENST00000342631 LCE1AQ5T7P2 110 aa5.86□□□□□ -1.47
SNED1-202ENST00000342631 SPRR2EP22531 72 aa5.84□□□□□ -1.47
SNED1-202ENST00000342631 SPRR2BP35325 72 aa5.84□□□□□ -1.47
SNED1-202ENST00000342631 SPRR2AP35326 72 aa5.84□□□□□ -1.47
SNED1-202ENST00000342631 KRTAP19-3Q7Z4W3 81 aa5.84□□□□□ -1.47
SNED1-202ENST00000342631 MT1LQ93083 61 aa5.84□□□□□ -1.47
SNED1-202ENST00000342631 MUC12Q9UKN1 5478 aa5.84□□□□□ -1.48
SNED1-202ENST00000342631 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.48
SNED1-202ENST00000342631 MT1GP13640 62 aa5.79□□□□□ -1.48
SNED1-202ENST00000342631 LCE5AQ5TCM9 118 aa5.78□□□□□ -1.48
SNED1-202ENST00000342631 MDN1Q9NU22 5596 aa5.76□□□□□ -1.49
SNED1-202ENST00000342631 INE1O15225 51 aa5.74□□□□□ -1.49
SNED1-202ENST00000342631 MT1MQ8N339 61 aa5.67□□□□□ -1.5
SNED1-202ENST00000342631 SPRR2DP22532 72 aa5.64□□□□□ -1.51
SNED1-202ENST00000342631 NEBP20929 6669 aa5.63□□□□□ -1.51
SNED1-202ENST00000342631 LCE3CQ5T5A8 94 aa5.62□□□□□ -1.51
SNED1-202ENST00000342631 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
SNED1-202ENST00000342631 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
SNED1-202ENST00000342631 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.53
SNED1-202ENST00000342631 KRTAP2-3P0C7H8 128 aa5.45□□□□□ -1.54
SNED1-202ENST00000342631 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
SNED1-202ENST00000342631 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
SNED1-202ENST00000342631 KRTAP20-1Q3LI63 56 aa5.4□□□□□ -1.54
SNED1-202ENST00000342631 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
SNED1-202ENST00000342631 KRTAP2-1Q9BYU5 128 aa5.31□□□□□ -1.56
SNED1-202ENST00000342631 DSTQ03001 7570 aaKnown RBP5.28□□□□□ -1.56
SNED1-202ENST00000342631 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
SNED1-202ENST00000342631 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
SNED1-202ENST00000342631 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.58
SNED1-202ENST00000342631 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
SNED1-202ENST00000342631 LCE4AQ5TA78 99 aa5.06□□□□□ -1.6
SNED1-202ENST00000342631 MT1AP04731 61 aa4.99□□□□□ -1.61
SNED1-202ENST00000342631 KRTAP6-1Q3LI64 71 aa4.89□□□□□ -1.63
SNED1-202ENST00000342631 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
SNED1-202ENST00000342631 MT4P47944 62 aa4.86□□□□□ -1.63
SNED1-202ENST00000342631 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
SNED1-202ENST00000342631 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
SNED1-202ENST00000342631 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
SNED1-202ENST00000342631 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
SNED1-202ENST00000342631 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
SNED1-202ENST00000342631 KRTAP20-2Q3LI61 65 aa4.72□□□□□ -1.65
SNED1-202ENST00000342631 HMCN1Q96RW7 5635 aa4.7□□□□□ -1.66
SNED1-202ENST00000342631 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
SNED1-202ENST00000342631 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
SNED1-202ENST00000342631 MT3P25713 68 aa4.55□□□□□ -1.68
SNED1-202ENST00000342631 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
SNED1-202ENST00000342631 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
SNED1-202ENST00000342631 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
SNED1-202ENST00000342631 LCE3DQ9BYE3 92 aa4.19□□□□□ -1.74
SNED1-202ENST00000342631 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
SNED1-202ENST00000342631 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
SNED1-202ENST00000342631 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
SNED1-202ENST00000342631 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
SNED1-202ENST00000342631 GPR98Q8WXG9 6306 aa4.03□□□□□ -1.76
SNED1-202ENST00000342631 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
SNED1-202ENST00000342631 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
SNED1-202ENST00000342631 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
SNED1-202ENST00000342631 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
SNED1-202ENST00000342631 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
SNED1-202ENST00000342631 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
SNED1-202ENST00000342631 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
SNED1-202ENST00000342631 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
SNED1-202ENST00000342631 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
SNED1-202ENST00000342631 PRM1P04553 51 aa3.57□□□□□ -1.84
SNED1-202ENST00000342631 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
SNED1-202ENST00000342631 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
SNED1-202ENST00000342631 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.88
SNED1-202ENST00000342631 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
SNED1-202ENST00000342631 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
SNED1-202ENST00000342631 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
SNED1-202ENST00000342631 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
SNED1-202ENST00000342631 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
SNED1-202ENST00000342631 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
SNED1-202ENST00000342631 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.04
SNED1-202ENST00000342631 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 58.5 ms