RNA–Protein interactions for RNA: ENST00000342628.6

FOXM1-201, Transcript of forkhead box M1, humanhuman

TSL 1 (best) BASIC

Gene FOXM1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-201ENST00000342628 KRTAP4-8A0A0G2JLE6 195 aa3.17□□□□□ -1.9
FOXM1-201ENST00000342628 SYNE2Q8WXH0 6885 aaKnown RBP3.15□□□□□ -1.91
FOXM1-201ENST00000342628 KMT2DO14686 5537 aa3.14□□□□□ -1.91
FOXM1-201ENST00000342628 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
FOXM1-201ENST00000342628 KRTAP6-3Q3LI67 103 aa3.14□□□□□ -1.91
FOXM1-201ENST00000342628 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
FOXM1-201ENST00000342628 SPRR2FQ96RM1 72 aa3.11□□□□□ -1.91
FOXM1-201ENST00000342628 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
FOXM1-201ENST00000342628 LCE5AQ5TCM9 118 aa3.06□□□□□ -1.92
FOXM1-201ENST00000342628 KRTAP19-5Q3LI72 72 aa3.06□□□□□ -1.92
FOXM1-201ENST00000342628 KRTAP12-3P60328 96 aa3.03□□□□□ -1.92
FOXM1-201ENST00000342628 KRTAP19-7Q3SYF9 63 aa3.03□□□□□ -1.92
FOXM1-201ENST00000342628 LCE1DQ5T752 114 aa3.03□□□□□ -1.92
FOXM1-201ENST00000342628 MT1EP04732 61 aa3□□□□□ -1.93
FOXM1-201ENST00000342628 SPRR2EP22531 72 aa3□□□□□ -1.93
FOXM1-201ENST00000342628 SPRR2BP35325 72 aa3□□□□□ -1.93
FOXM1-201ENST00000342628 SPRR2AP35326 72 aa3□□□□□ -1.93
FOXM1-201ENST00000342628 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
FOXM1-201ENST00000342628 LCE1AQ5T7P2 110 aa2.95□□□□□ -1.94
FOXM1-201ENST00000342628 KRTAP4-7Q9BYR0 210 aa2.95□□□□□ -1.94
FOXM1-201ENST00000342628 MDN1Q9NU22 5596 aa2.95□□□□□ -1.94
FOXM1-201ENST00000342628 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
FOXM1-201ENST00000342628 KRTAP4-9Q9BYQ8 210 aa2.94□□□□□ -1.94
FOXM1-201ENST00000342628 NEBP20929 6669 aa2.93□□□□□ -1.94
FOXM1-201ENST00000342628 MT1GP13640 62 aa2.92□□□□□ -1.94
FOXM1-201ENST00000342628 MT1LQ93083 61 aa2.92□□□□□ -1.94
FOXM1-201ENST00000342628 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
FOXM1-201ENST00000342628 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.94
FOXM1-201ENST00000342628 SPRR2DP22532 72 aa2.9□□□□□ -1.95
FOXM1-201ENST00000342628 MT1MQ8N339 61 aa2.85□□□□□ -1.95
FOXM1-201ENST00000342628 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
FOXM1-201ENST00000342628 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
FOXM1-201ENST00000342628 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
FOXM1-201ENST00000342628 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
FOXM1-201ENST00000342628 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
FOXM1-201ENST00000342628 KRTAP2-2Q9BYT5 123 aa2.73□□□□□ -1.97
FOXM1-201ENST00000342628 KRTAP2-1Q9BYU5 128 aa2.73□□□□□ -1.97
FOXM1-201ENST00000342628 DSTQ03001 7570 aaKnown RBP2.72□□□□□ -1.97
FOXM1-201ENST00000342628 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
FOXM1-201ENST00000342628 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -2
FOXM1-201ENST00000342628 MT3P25713 68 aa2.58□□□□□ -2
FOXM1-201ENST00000342628 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
FOXM1-201ENST00000342628 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
FOXM1-201ENST00000342628 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
FOXM1-201ENST00000342628 MT4P47944 62 aa2.51□□□□□ -2.01
FOXM1-201ENST00000342628 MT1AP04731 61 aa2.5□□□□□ -2.01
FOXM1-201ENST00000342628 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
FOXM1-201ENST00000342628 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
FOXM1-201ENST00000342628 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
FOXM1-201ENST00000342628 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
FOXM1-201ENST00000342628 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
FOXM1-201ENST00000342628 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
FOXM1-201ENST00000342628 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
FOXM1-201ENST00000342628 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
FOXM1-201ENST00000342628 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
FOXM1-201ENST00000342628 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
FOXM1-201ENST00000342628 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
FOXM1-201ENST00000342628 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
FOXM1-201ENST00000342628 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
FOXM1-201ENST00000342628 PRM1P04553 51 aa2.13□□□□□ -2.07
FOXM1-201ENST00000342628 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
FOXM1-201ENST00000342628 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
FOXM1-201ENST00000342628 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
FOXM1-201ENST00000342628 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
FOXM1-201ENST00000342628 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
FOXM1-201ENST00000342628 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
FOXM1-201ENST00000342628 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
FOXM1-201ENST00000342628 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
FOXM1-201ENST00000342628 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
FOXM1-201ENST00000342628 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
FOXM1-201ENST00000342628 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
FOXM1-201ENST00000342628 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
FOXM1-201ENST00000342628 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
FOXM1-201ENST00000342628 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
FOXM1-201ENST00000342628 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
FOXM1-201ENST00000342628 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
FOXM1-201ENST00000342628 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms