RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
LIMK2-203ENST00000340552 CRCT1Q9UGL9 99 aa5.23□□□□□ -1.57
LIMK2-203ENST00000340552 MT1EP04732 61 aa5.18□□□□□ -1.58
LIMK2-203ENST00000340552 MT1LQ93083 61 aa5.11□□□□□ -1.59
LIMK2-203ENST00000340552 MACF1Q9UPN3 7388 aaKnown RBP5.05□□□□□ -1.6
LIMK2-203ENST00000340552 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
LIMK2-203ENST00000340552 MUC12Q9UKN1 5478 aa5.03□□□□□ -1.6
LIMK2-203ENST00000340552 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
LIMK2-203ENST00000340552 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
LIMK2-203ENST00000340552 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
LIMK2-203ENST00000340552 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
LIMK2-203ENST00000340552 MT1GP13640 62 aa4.9□□□□□ -1.63
LIMK2-203ENST00000340552 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
LIMK2-203ENST00000340552 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
LIMK2-203ENST00000340552 MT1MQ8N339 61 aa4.87□□□□□ -1.63
LIMK2-203ENST00000340552 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
LIMK2-203ENST00000340552 KRTAP9-7A8MTY7 169 aa4.83□□□□□ -1.64
LIMK2-203ENST00000340552 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
LIMK2-203ENST00000340552 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
LIMK2-203ENST00000340552 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
LIMK2-203ENST00000340552 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
LIMK2-203ENST00000340552 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
LIMK2-203ENST00000340552 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
LIMK2-203ENST00000340552 SPRR2EP22531 72 aa4.63□□□□□ -1.67
LIMK2-203ENST00000340552 SPRR2BP35325 72 aa4.63□□□□□ -1.67
LIMK2-203ENST00000340552 SPRR2AP35326 72 aa4.63□□□□□ -1.67
LIMK2-203ENST00000340552 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
LIMK2-203ENST00000340552 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
LIMK2-203ENST00000340552 PRM1P04553 51 aa4.54□□□□□ -1.68
LIMK2-203ENST00000340552 KRTAP5-5Q701N2 237 aaPredicted RBP4.5□□□□□ -1.69
LIMK2-203ENST00000340552 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
LIMK2-203ENST00000340552 SPRR2DP22532 72 aa4.45□□□□□ -1.7
LIMK2-203ENST00000340552 MT1AP04731 61 aa4.45□□□□□ -1.7
LIMK2-203ENST00000340552 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
LIMK2-203ENST00000340552 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.7
LIMK2-203ENST00000340552 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
LIMK2-203ENST00000340552 NEBP20929 6669 aa4.34□□□□□ -1.71
LIMK2-203ENST00000340552 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
LIMK2-203ENST00000340552 KRTAP2-2Q9BYT5 123 aa4.3□□□□□ -1.72
LIMK2-203ENST00000340552 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
LIMK2-203ENST00000340552 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.73
LIMK2-203ENST00000340552 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
LIMK2-203ENST00000340552 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
LIMK2-203ENST00000340552 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
LIMK2-203ENST00000340552 MT3P25713 68 aa3.91□□□□□ -1.78
LIMK2-203ENST00000340552 LCE4AQ5TA78 99 aa3.91□□□□□ -1.78
LIMK2-203ENST00000340552 MT4P47944 62 aa3.9□□□□□ -1.79
LIMK2-203ENST00000340552 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
LIMK2-203ENST00000340552 LCE1DQ5T752 114 aa3.84□□□□□ -1.8
LIMK2-203ENST00000340552 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
LIMK2-203ENST00000340552 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.8
LIMK2-203ENST00000340552 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
LIMK2-203ENST00000340552 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
LIMK2-203ENST00000340552 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
LIMK2-203ENST00000340552 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
LIMK2-203ENST00000340552 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
LIMK2-203ENST00000340552 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.86
LIMK2-203ENST00000340552 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.87
LIMK2-203ENST00000340552 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
LIMK2-203ENST00000340552 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
LIMK2-203ENST00000340552 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
LIMK2-203ENST00000340552 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
LIMK2-203ENST00000340552 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
LIMK2-203ENST00000340552 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
LIMK2-203ENST00000340552 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
LIMK2-203ENST00000340552 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
LIMK2-203ENST00000340552 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
LIMK2-203ENST00000340552 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
LIMK2-203ENST00000340552 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
LIMK2-203ENST00000340552 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
LIMK2-203ENST00000340552 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
LIMK2-203ENST00000340552 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
LIMK2-203ENST00000340552 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
LIMK2-203ENST00000340552 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -2
LIMK2-203ENST00000340552 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -2
LIMK2-203ENST00000340552 PHGR1C9JFL3 82 aa2.34□□□□□ -2.04
LIMK2-203ENST00000340552 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 146.9 ms